Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g01979 | ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTATGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGACGTAACATCACTGTGAACGAGGCGCAGTCCCGTGGTCGGGGTGGTGGCGGCGGTGGTGGTTACGGTAGTGGTGGCGGCGGTGGTTATGGTGGTGGTGGTTACAACCGTGGAGGAGGAGGAGGAGGTGGTGGATATGGAGGCCGCCGTGAAGGCGGAGGTGGTTACAACCGCGGCGGAGGTGGTGGAGGCTACGGTGGTAACGGTGGTAATGGTGGAGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAAACGGTGGATCCCGTTACTCAAAGGGTGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG | 555 | 0.582 | MASAEIEYRCFVGGLAWATDNEALEKAFSSYGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGYNRGGGGGGGGYGGRREGGGGYNRGGGGGGYGGNGGNGGGGYGGGGYGGGRDRGYGNGGSRYSKGGGASDGNWRN | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g01979 | 184 | PANTHER | RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED | 1 | 140 | - | - | |
Aip07g01979 | 184 | Gene3D | - | 2 | 122 | IPR012677 | - | |
Aip07g01979 | 184 | SMART | rrm1_1 | 9 | 82 | IPR000504 | GO:0003723 | |
Aip07g01979 | 184 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 8 | 86 | IPR000504 | GO:0003723 | |
Aip07g01979 | 184 | SUPERFAMILY | RNA-binding domain, RBD | 9 | 118 | IPR035979 | GO:0003676 | |
Aip07g01979 | 184 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 79 | IPR000504 | GO:0003723 | |
Aip07g01979 | 184 | MobiDBLite | consensus disorder prediction | 150 | 184 | - | - | |
Aip07g01979 | 184 | PANTHER | GEO13361P1-RELATED | 1 | 140 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g01979 | Aip-Chr7 | 57365745 | 57367288 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g01979 | 10 | 88 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 34.177 | 1.61e-06 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g01979 | - | K13195 | gmx:100777821 | 165.622 |