Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01979 ATGGCTTCCGCAGAAATTGAGTACCGTTGCTTCGTTGGTGGGCTTGCCTGGGCCACCGACAACGAAGCCCTCGAGAAAGCCTTCTCTTCCTATGGCGAGATCGTCGAATCGAAGGTTATCAATGATCGTGAGACTGGAAGGTCGAGGGGTTTCGGATTTGTAACCTTCGCCACAGAGCAGGCCATGAGGGATGCCATCGAGGGGATGAATGGCCAGAACCTTGATGGACGTAACATCACTGTGAACGAGGCGCAGTCCCGTGGTCGGGGTGGTGGCGGCGGTGGTGGTTACGGTAGTGGTGGCGGCGGTGGTTATGGTGGTGGTGGTTACAACCGTGGAGGAGGAGGAGGAGGTGGTGGATATGGAGGCCGCCGTGAAGGCGGAGGTGGTTACAACCGCGGCGGAGGTGGTGGAGGCTACGGTGGTAACGGTGGTAATGGTGGAGGTGGCTATGGAGGAGGTGGTTACGGTGGTGGGCGGGACCGTGGGTACGGAAACGGTGGATCCCGTTACTCAAAGGGTGGTGGTGCTTCTGATGGAAATTGGAGGAATTAG 555 0.582 MASAEIEYRCFVGGLAWATDNEALEKAFSSYGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEAQSRGRGGGGGGGYGSGGGGGYGGGGYNRGGGGGGGGYGGRREGGGGYNRGGGGGGYGGNGGNGGGGYGGGGYGGGRDRGYGNGGSRYSKGGGASDGNWRN 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01979 184 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 140 - -
Aip07g01979 184 Gene3D - 2 122 IPR012677 -
Aip07g01979 184 SMART rrm1_1 9 82 IPR000504 GO:0003723
Aip07g01979 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Aip07g01979 184 SUPERFAMILY RNA-binding domain, RBD 9 118 IPR035979 GO:0003676
Aip07g01979 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Aip07g01979 184 MobiDBLite consensus disorder prediction 150 184 - -
Aip07g01979 184 PANTHER GEO13361P1-RELATED 1 140 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip07g01979 Aip-Chr7 57365745 57367288 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01979 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 1.61e-06 45.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01979 - K13195 gmx:100777821 165.622