Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01976 ATGAACCCGCTTGCAAGGAGTCTAGAGGAGTTTCTGCCCCATAGAATTTCAAGTACCACTTGGTGTTTCATGCTGCTCAGAACAATATTGGTTATGGCTACACATTTAACTGGTTTTCTCATTCCTTATTATGGACTTGTGATGGCTTTAATTGGTTCTCTCCTCAGTACACTTGTGAATGGGGGTGAGCCCGAAGAGAAGAAAGTGTGTGGCCGGCCTAGGAAAGCAGCTTCACAGTGCAATACTATGAGGGCCAAAAGGGCAGTTGTTGCTATGCTTGCAAGATCAAAAGAAAGTGTGAAGATAGAAGATATTAACATGACTGAGGAGGAAAGAACTGAGGAGGAAAGAACTGAGAAAGAACAGAAGGAGCTTATGCCTTTACTCATGGGCGGAAAATTAAAGTCTTATCAGCTTAAAGGTGTAAAGTGGTTGATTTCACTACAAAATAATATGTATTAA 462 0.4113 MNPLARSLEEFLPHRISSTTWCFMLLRTILVMATHLTGFLIPYYGLVMALIGSLLSTLVNGGEPEEKKVCGRPRKAASQCNTMRAKRAVVAMLARSKESVKIEDINMTEEERTEEERTEKEQKELMPLLMGGKLKSYQLKGVKWLISLQNNMY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01976 153 Coils Coil 105 125 - -
Aip07g01976 153 PANTHER BNAC07G16550D PROTEIN 63 151 - -
Aip07g01976 153 PANTHER SNF2/RAD54 HELICASE FAMILY 63 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01976 Aip-Chr7 57038000 57039834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01976 1 45 Amino Acid or Auxin Permease AAAP Family AT2G41190 60.000 1.65e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01976 K19001 - gmx:100817842 108.997