Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01973 ATGGCAGCAACCTCCACGGAATCCACCGCTGGTGCTCTGCCGGAGCTGACCAACCGAACTACATTTTTAGGTCTGAAGCTGTACGTGTTAGTGATGGTTTTTTTGGCGATCGTGGTGGCATTGTTGATCGTGATTTATGTGTGCTTTTGGCGTAGCAGCAGAAGCTCGAAGAAGGGGAAAATGCGAGTGAAGCACAGCTCAGGCGGGATCCCACTGGTTTCAAAGGAGATTGTGGAGGTTAATGCATTGGATCTCGCGGATCATCTCAAAATGGAAAAAGAAGAAGAAGAAGAAGACACGGTCGTTGATGTTGATCCTAATCGGAAGCAAGAACAGAAGCAGCAGAAGAAGGAGAAGGAGGAATGTGAGATCAAGGTTGAGGGAATAATAAAAGGGAGTAAGAAGAGGAGGGAGGAGGAGTCGGTGGAGTCTTCGCCGAACATAGGGTGGGGGCGGTGGTACAGCATGTCAGAAGTGGAAGAAGCGACGGATGGGTTTGCGGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGTGTTCTTGGCGACGGTTCTATCGTCGCTGTCAAGAATCTTCTTAACAACAAGGGCCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAGACCATTGGAAAAGTGAGGCATAAGAATTTGGTACGTTTAGTTGGATACTGTGCACAAGGTGCTAAGAGGATGCTTGTTTATGAATACGTTGATAATGGAAATTTGGAGCAGTGGCTACATGGGGATGTAGGCCCTGTTAGCCCCTTGACATGGGATATACGAATGAGGATTGCTGTTGGAACCGCCAAAGGATTAGCCTACTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAATTGGAATGCCAAAGTATCTGATTTCGGACTGGCCAAACTCTTAGGCTCAGAGAAAAGCTATGTCACAACGCGTGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGTACAGGAATGCTCAATGAATGCAGTGATGTGTATAGCTTTGGGATGCTACTAATGGAGCTAATTACAGGAAGAAGTCCTATTGATTATTCCAGACCACCTGCAGAGATGAACTTGGTTGACTGGTTTAAGGGAATGGTAACAAGTCGTCGTGGCGATGAGCTAGTCGATCCTTTAATTGAGATTAAACCCTCTCCAAGATCTCTGAAGCGAGCTTTGCTGGTTTGTTTGCGCTGTATAGACTTGGATGTCATTAAGCGACCAAAGATGGGTCAAATTGTTCACATGCTTGAAGCTGACGATTACCCATTTCGTTGTGAGGTTCATACATATAGAGAGAAAGACCCTTCTCCTTCTCATACAACTGTTGCTTTTCCAACAAGGCAGGTGGAGTCAGTACATAAACCAAGCTGGAGGAGATGA 1443 0.4574 MAATSTESTAGALPELTNRTTFLGLKLYVLVMVFLAIVVALLIVIYVCFWRSSRSSKKGKMRVKHSSGGIPLVSKEIVEVNALDLADHLKMEKEEEEEDTVVDVDPNRKQEQKQQKKEKEECEIKVEGIIKGSKKRREEESVESSPNIGWGRWYSMSEVEEATDGFAEGNVIGEGGYGIVYRGVLGDGSIVAVKNLLNNKGQAEKEFKVEVETIGKVRHKNLVRLVGYCAQGAKRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNECSDVYSFGMLLMELITGRSPIDYSRPPAEMNLVDWFKGMVTSRRGDELVDPLIEIKPSPRSLKRALLVCLRCIDLDVIKRPKMGQIVHMLEADDYPFRCEVHTYREKDPSPSHTTVAFPTRQVESVHKPSWRR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01973 480 PANTHER OS03G0227900 PROTEIN 15 454 - -
Aip07g01973 480 MobiDBLite consensus disorder prediction 92 117 - -
Aip07g01973 480 MobiDBLite consensus disorder prediction 102 117 - -
Aip07g01973 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Aip07g01973 480 SMART serkin_6 166 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01973 480 PANTHER OS01G0323000 PROTEIN 15 454 - -
Aip07g01973 480 Gene3D Transferase(Phosphotransferase) domain 1 242 449 - -
Aip07g01973 480 Pfam Protein kinase domain 168 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01973 480 ProSiteProfiles Protein kinase domain profile. 166 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01973 480 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Aip07g01973 480 SUPERFAMILY Protein kinase-like (PK-like) 142 439 IPR011009 -
Aip07g01973 480 CDD STKc_IRAK 172 438 - -
Aip07g01973 480 Gene3D Phosphorylase Kinase; domain 1 129 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01973 Aip-Chr7 56786585 56790395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01973 144 438 Receptor kinase-like Gene Family AT4G02010 47.492 1.09e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip07g01973 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01973 - - gmx:100779420 662.914