Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01969 ATGAGCACGACGGCTATAATAGGAATCGCAGCTGCAAGTGGTTTCTTACTTCTTGTCATCATACTCTTCTTTGTCGTACGTGCAAGAAGAAAGAAAAGAGAGGACGCTCCCATTCGTTACTTCACTAATACACAACCTGGCGGACGAGGTCCGGGATACAATAATAATGATGGTGACCATGCTATGAATATACCTCCACCACCAGGTGCAGCATGGGGAACAGTAGGAACAGCACCAACATCAGGCGGAGGTTGGGGAATGAATCCCAATTCCCAGCCATACAGTGGAAGCATGATGAGCAACTCCAGTGGTTACTCTGGTGGTTCCCAGGGTTCAGTGTATCCACCCCCACACCCTTCAGTAGCTCTAGGATTCAACCAGAGCACCTTCACCTTTGAGGAGTTATCCGTTGCCACCGGTGGCTTTTCAAAGGAAAACCTGTTGGGTCAAGGTGGGTTTGGATTTGTGCACAGAGGTGTCCTCCCCAATGGTAAGGAAGTAGCGGTGAAGAGCCTCAAAGCCAATGATGCTCAAGGAGATAGAGAGTTTCAAGCTGAGGTTGAGACTATTAGCCGTGTCCATCATCGCCATCTTGTCTCACTTGTTGGCTATTCCCTTTCCGAACAAAGAAAGATCCTCGTCTATGAATTTGTTCCCAATAAAACCCTTGAATACCACCTTCATGGAAAGGGTCGGCCTGTCATGGATTGGCCAACTAGGCTTAAAATCGCCACAGGAGCAGCGAAAGGACTTGCTTACTTGCATGAGGATTGTCATCCTCGTATTATTCATAGAGACATAAAGACTGCCAACATTCTGCTTGAAAACAACTTTGATGCCAAAGTGGCTGATTTTGGATTGGCAAAGTTCAATCAAGACACTAACACTCATGTTTCAACTCGTGTGATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCATCAAGTGGCAAGCTAACTGAAAAGTCTGATGTCTTCTCCTTCGGTGTTATGCTTCTGGAGCTGATTACAGGACGACCCCCACTGGACCACACTGGTGATTATGAAGAGGATAGTTTGGTTGATTGGGCTAGACCACTCTGTGCAAAAGCATTGGAAACAGGAGAATTTACAGGGCTAGTGGATCCACGTTTAGAGGAAAATTATGACAAGCAGGAAATGAAAAACATGGTGGCTTGCGCTGCTGCCAGTGTTAGGCACTCAGCAAGGAGACGCGCAAAAATGAGCCAGATTGTGCGAGTGTTGGAGGGAGATGTCTCACTAGACGTCCTTAATAACGAAGGAGTTAAACCAGGGCAAAGTGGTGTCATGGGCGAAAGCGGTGATTATGGTTCTGCAGCATATAGCGCTGACATGAAGAGGTTCAGGATGCTAGCATTGGGAGAAAGTGGAGTTGCAAGCAGTGAGTTTGGTGGAACAAGCGAATATGGCCTCAATCCTTCTGTCTCAAGCAGTGACCTATCAACATCCACTGAATATACGAGGAGGCTATGA 1494 0.4692 MSTTAIIGIAAASGFLLLVIILFFVVRARRKKREDAPIRYFTNTQPGGRGPGYNNNDGDHAMNIPPPPGAAWGTVGTAPTSGGGWGMNPNSQPYSGSMMSNSSGYSGGSQGSVYPPPHPSVALGFNQSTFTFEELSVATGGFSKENLLGQGGFGFVHRGVLPNGKEVAVKSLKANDAQGDREFQAEVETISRVHHRHLVSLVGYSLSEQRKILVYEFVPNKTLEYHLHGKGRPVMDWPTRLKIATGAAKGLAYLHEDCHPRIIHRDIKTANILLENNFDAKVADFGLAKFNQDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRPPLDHTGDYEEDSLVDWARPLCAKALETGEFTGLVDPRLEENYDKQEMKNMVACAAASVRHSARRRAKMSQIVRVLEGDVSLDVLNNEGVKPGQSGVMGESGDYGSAAYSADMKRFRMLALGESGVASSEFGGTSEYGLNPSVSSSDLSTSTEYTRRL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01969 497 MobiDBLite consensus disorder prediction 469 497 - -
Aip07g01969 497 Pfam Protein kinase domain 143 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01969 497 SMART serkin_6 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01969 497 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
Aip07g01969 497 Gene3D Transferase(Phosphotransferase) domain 1 218 426 - -
Aip07g01969 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Aip07g01969 497 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 3 464 - -
Aip07g01969 497 SUPERFAMILY Protein kinase-like (PK-like) 120 415 IPR011009 -
Aip07g01969 497 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 464 - -
Aip07g01969 497 Gene3D Phosphorylase Kinase; domain 1 119 217 - -
Aip07g01969 497 ProSiteProfiles Protein kinase domain profile. 142 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01969 497 MobiDBLite consensus disorder prediction 469 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01969 Aip-Chr7 56659323 56662087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01969 6 495 Trihelix Transcription Factor Family AT1G70460 49.299 1.13e-149 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip07g01969 Pkinase 8.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01969 - - gmx:100806299 657.907