Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01963 ATGGAACTTCCCTCCTTCACGCGGTGCTTCTCTACTTCGATCACCCTCTCCTCTATGACGGCTAGGGTTTGGTGGTGTGGCGGTCAGACAACGGCGACGGTGGCTGTGTTCATCACCGGCACGACTAGGGTTTGGTGGTGTGGCTCTCCCTGGTGGAAGATAGAGCTCATCGTCGGTGCTTGCACTCTCTCCTCTGCCGGCGCTCCCTCCGTCGTCTCCCCTAACCCATCTCTGCTGGCGCTCGCATTCCCTGTCGCTCACTCTCTCCTCTGCTCGCATTCTCTGCCCTCCTCCCTCGTCATGTTGCTCAATCTTCCACCACCTTCGAAGTCCTCACTGCATGCATATGACGTTGTGAAGAGGGATGTATCAGCAACAGATGCTTCTTTCTTAGGTTCATATGCCTCTGCTGGGACGAAGAGATCTGCAAGAGACAGGCTCGGAAATAATGCTGACAGTTCCTCGTGGTATGGGAATGAACTCAGCAGCAATAGTTGTGGGAATGAACTCGTGGGTGCCAATATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGAGGCCTCCAAACAAGTTGTTGAGCTGAGCCATGCTGTCCTTGCTTTCCACGAAGCTGCTGAAGCCTACATGGTTGGTTTGTTTGAGGACACCAACTTGTGTGCCATCCATGCCAAGAGGTCACCACAATGCCCAAAGACATTTAGCTTGCTCGCCGCATCCGTGGTGAACGTGCTTAGGCTGATTGATTTCATGCTCCTTGATCGTTTCGGAATACACATTGTGTTACTAGTTTAG 801 0.5144 MELPSFTRCFSTSITLSSMTARVWWCGGQTTATVAVFITGTTRVWWCGSPWWKIELIVGACTLSSAGAPSVVSPNPSLLALAFPVAHSLLCSHSLPSSLVMLLNLPPPSKSSLHAYDVVKRDVSATDASFLGSYASAGTKRSARDRLGNNADSSSWYGNELSSNSCGNELVGANILVDNKGCIKLADFEASKQVVELSHAVLAFHEAAEAYMVGLFEDTNLCAIHAKRSPQCPKTFSLLAASVVNVLRLIDFMLLDRFGIHIVLLV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01963 266 PANTHER HISTONE H3 197 238 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aip07g01963 266 Gene3D Histone, subunit A 185 242 IPR009072 GO:0046982
Aip07g01963 266 Pfam Core histone H2A/H2B/H3/H4 198 229 IPR007125 GO:0003677
Aip07g01963 266 PANTHER HISTONE H3.3 197 238 - -
Aip07g01963 266 SUPERFAMILY Histone-fold 198 229 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01963 Aip-Chr7 55773003 55780246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01963 169 198 MAP Kinase Kinase Kinase AT1G09000 80.000 2.46e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01963 K11253 - osa:4336000 68.1662