Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01958 ATGTCTCACAACAATCACATAACCACCGATTCCCCGCTCTCTCGTCGCATAGTTCGTTCCTTCCTGCAATTCCTCAACTCTGTTGAACCAGGGCCTGGGGTTGATGCCGAAGGGATTGAGGTTGCTAGGGAGTGTTTGGCAGAGGCCTTTAAGCTAAACTGTGCTGGTGTAGATGGTGATCCGCAATCTGATTCCTTGATTGACATGTTCAAGAGCCTTGAAGCAAGAAAGCAGCGTGAAACTATCAAGTCAGACCCTAGTCCTATGGATGCTTCTAGTTCATTCTCTGACCATAATCCATCATCCTTTGCTCAAAATCATATGAAGGATCAAGATTGGACACAGGGCACTGACATTTTTGCAGCATCCAAAGATGAACTCTGTGGAAAATTTTTTGCATCTCTGGAGAAAAATCACTATTTTAGGGTGAATCACGATGGAACTGATGACCCAATGCAACTAGAGAAAGCATCTTGTTTATTTGATAATGCTTTTAAGGAGATGGAAAAATCTGGGTCCCCAGTATTAAATCTGAAGAATTTGGCTGAATCACTGAAATCACTAGGTAACAAGGCAATGCAATCCAAGCAATACCATGATGCAATTGAGTTGTATAATTGTGCAATTGCAGTGCATGAAAAAAGTGCTGTTTATTACTGCAACAGGGCAGCAGCTTACACTCAGCTTAAAAAATATGATGAAGCAATCCAAGATTGTCTTAGATCTATTGAGATTGATCCAAACTACAGCAAGGCTTACAGTCGTTTGGGGTTAGTATACTATGCTCAAGGAAACTACAGCTTTGCTATTGATAAAGGGTTCAGAAAAGCCTTGCTATTGGATCCAAATAACGAAGCTGTTAAAGAAAATATACGGGTGGCTGAGCATAAATTGCGAGAAGAGCAACACCATGCAAATCATAATCAGAGTTCAAGATCATCTTGGGAATTCCCGAACCAATCGACAAGAGGATCAAGAAGCCATGGAGTGCCACCTTTTCCATCAGTGCCATTTAACCCAAATGATATAGCAAGCATGTTCAGAGACATGGCTGCAAATGTCACAGGTTCGCACCATGGGTCGCAGTCTCAGGAACGGCCAGTGGATGCCAATGCCACAAGTGCTAACGAACCGGAAATAAGAATTGGTGGCAATATTAATTTGAACTTTGATGAAATGTCTGATGATGTAACAGGAGCCTTTAGATCTATGATGGAGATGTTCTCTGGGAGCTCGTCTCAAGGGCAACGACAAGATCATATGAATGGAAGAGCAGCTCCAAACTAA 1287 0.4219 MSHNNHITTDSPLSRRIVRSFLQFLNSVEPGPGVDAEGIEVARECLAEAFKLNCAGVDGDPQSDSLIDMFKSLEARKQRETIKSDPSPMDASSSFSDHNPSSFAQNHMKDQDWTQGTDIFAASKDELCGKFFASLEKNHYFRVNHDGTDDPMQLEKASCLFDNAFKEMEKSGSPVLNLKNLAESLKSLGNKAMQSKQYHDAIELYNCAIAVHEKSAVYYCNRAAAYTQLKKYDEAIQDCLRSIEIDPNYSKAYSRLGLVYYAQGNYSFAIDKGFRKALLLDPNNEAVKENIRVAEHKLREEQHHANHNQSSRSSWEFPNQSTRGSRSHGVPPFPSVPFNPNDIASMFRDMAANVTGSHHGSQSQERPVDANATSANEPEIRIGGNINLNFDEMSDDVTGAFRSMMEMFSGSSSQGQRQDHMNGRAAPN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01958 428 MobiDBLite consensus disorder prediction 308 328 - -
Aip07g01958 428 MobiDBLite consensus disorder prediction 354 378 - -
Aip07g01958 428 PANTHER LD24721P 10 425 - -
Aip07g01958 428 Pfam Tetratricopeptide repeat 216 249 IPR001440 GO:0005515
Aip07g01958 428 PANTHER LD24721P 10 425 - -
Aip07g01958 428 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Aip07g01958 428 MobiDBLite consensus disorder prediction 408 428 - -
Aip07g01958 428 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Aip07g01958 428 MobiDBLite consensus disorder prediction 355 371 - -
Aip07g01958 428 MobiDBLite consensus disorder prediction 78 106 - -
Aip07g01958 428 Gene3D Tetratricopeptide repeat domain 177 335 IPR011990 GO:0005515
Aip07g01958 428 MobiDBLite consensus disorder prediction 85 106 - -
Aip07g01958 428 MobiDBLite consensus disorder prediction 301 337 - -
Aip07g01958 428 SUPERFAMILY TPR-like 181 295 IPR011990 GO:0005515
Aip07g01958 428 Gene3D Immunoglobulin FC, subunit C 1 76 - -
Aip07g01958 428 Coils Coil 284 304 - -
Aip07g01958 428 ProSiteProfiles TPR repeat profile. 250 284 IPR019734 GO:0005515
Aip07g01958 428 SMART tpr_5 182 215 IPR019734 GO:0005515
Aip07g01958 428 SMART tpr_5 250 284 IPR019734 GO:0005515
Aip07g01958 428 SMART tpr_5 216 249 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01958 181 317 U-box Gene Family AT3G07370 27.586 2.16e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01958 K16365 - gmx:100775346 562.377