Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01933 ATGAATAATCGTGTTGATTTGGTGGAGAAAATCACTCCCTGGAGGGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAAAATCCTGCTTTGGATCCTTCTCAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAAGCTACGATTAGAGATCAGCTTATATCAAAGTTTGCTGTGTCTCTAAATGAAGGTGATCTGTATTTGATGACCCATTTTACAGTTTTGCCAAACACTGGTTTGAACAGAGTGACCAAACATCGGTTCAGACTTTTGTTCCAATACAAGACCTCTGTTGTTTCTGTGGTCTCTCCAAGGATACCTCATTCCGGGTTGTGTTTTACATCAATAGATGAAATTGATCAAATGACAAAGGACCATAATTTCCTCATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTCATCAAAGCAGTTGTGCTAGAAGTTTTTACTCATGGGAAAAAGGTCCAATGCAATGTGTTTGGAAATGCTTGTGATCTCTTGGAATATGAAAACTTACAAAAATATCCAAGATCTCCGATGATTGTCCTTGAGTCTTTTAAAATCAAACCAATTGAAGGTGGAGTAATTCTACAGAATGTGATCAATGTCTCTAGGTTATTCATTAATCCAGACATTCCTGAGTCTGTTGAGTTCCTAAGCAGATTTAGTGTAGCCAGTTATGGATTCTCAAGACTTGTGACCAATGACCTTGGATACTTAATTTCTAAAGTTGATGGTGATTATTTCAATCCCAAAGAGATCAGTAATATTCAAGATCTTGATGATGCTCATTACTTTGTAATTGGGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTATGTGGTCATGCTGTTGTTGACCATGAGGATCTCTACCTTTGTGATGCTTGTGGTTCATGTGTTGAACATGTTATGCTCAAGTATAGGATTCGGGTAAAGATTCACCATGCTGGGTGTGATGTTTTGTTTGTTCTGCTTGATAATGCGGCAACAAAACTATTTGGAAAAACCTGTTCTGAAGCATTTCTCAGGATAGACGAAGAATTCCCTGTTGATCCTAGTGTGCTTGCAGTCTGTCGGTCATATTCTCCACAAATGTTTGGTGATGTTGTTGGAGAGGATAAAGTTTTCAAGGTTAAAATCCTTTCTACAGTTGATCCAGATTACTCCGAGTCCTTTAAAATTCTTCAATGCATTGATGCTGTCCCAAGATTCTGCTTGAAGATTGTAGTTTCTCATGCAAATGGCAACAATATATTTGTTCTTAAAGATCGTGAGGTTGTGCAACTGATAAAGACAAGATGCTCCACCTTTTTGGATAATCACCCAGAGTTGAATCAGGGATCTTATTGCAAAGTTGTTCCATTGAAACTCATTTCAAGTCTTTTGCACAAAAAAGTTGTATTCATGGTTGATGCTAGGCCTGTGGGTTATGAGATGAATCGATCTGTATATATTGTTCAACAAATTTGGGATGATGCCTCTGTTATTAATGTTTTTGAGGCTGCTACTGAGATGAATGAGCATAAGATTCATGTTTTGGTTGATTCTATGCCTGAAGTTGAAGATGCTTTTAGCCAATGTGGAAGCGATCATGAGGCTGTGGAAGATTTAGATGCTTTTTAG 1704 0.3779 MNNRVDLVEKITPWRESWKVHVKVVKLWYHKNPALDPSQNLLHMVLMDEKLHKIQATIRDQLISKFAVSLNEGDLYLMTHFTVLPNTGLNRVTKHRFRLLFQYKTSVVSVVSPRIPHSGLCFTSIDEIDQMTKDHNFLIDFVGIITGVRKERDVASYGKLIKAVVLEVFTHGKKVQCNVFGNACDLLEYENLQKYPRSPMIVLESFKIKPIEGGVILQNVINVSRLFINPDIPESVEFLSRFSVASYGFSRLVTNDLGYLISKVDGDYFNPKEISNIQDLDDAHYFVIGTIKEVMDEPDWWYYSCVCGHAVVDHEDLYLCDACGSCVEHVMLKYRIRVKIHHAGCDVLFVLLDNAATKLFGKTCSEAFLRIDEEFPVDPSVLAVCRSYSPQMFGDVVGEDKVFKVKILSTVDPDYSESFKILQCIDAVPRFCLKIVVSHANGNNIFVLKDREVVQLIKTRCSTFLDNHPELNQGSYCKVVPLKLISSLLHKKVVFMVDARPVGYEMNRSVYIVQQIWDDASVINVFEAATEMNEHKIHVLVDSMPEVEDAFSQCGSDHEAVEDLDAF 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01933 567 Gene3D - 7 111 IPR012340 -
Aip07g01933 567 SUPERFAMILY Nucleic acid-binding proteins 7 110 IPR012340 -
Aip07g01933 567 Pfam Domain of unknown function DUF223 44 136 IPR003871 -
Aip07g01933 567 Gene3D - 114 248 IPR012340 -
Aip07g01933 567 CDD RPA1_DBD_A_like 19 107 - -
Aip07g01933 567 SUPERFAMILY Nucleic acid-binding proteins 269 413 IPR012340 -
Aip07g01933 567 Gene3D - 415 521 IPR012340 -
Aip07g01933 567 Gene3D - 266 414 IPR012340 -
Aip07g01933 567 SUPERFAMILY Nucleic acid-binding proteins 122 244 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01933 Aip-Chr7 53093096 53096400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01933 1 364 Core DNA Replication Machinery Family AT5G08020 20.513 4.86e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01933 - - adu:110276056 942.569