Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01931 ATGAAATCATCATCACAAGTGAGTACCAACATAGTGAAGCTCACGGAGTCGTTCTCCCATTCGACGGTTTCGGCAGCAAGTTCACAAGTGCAAAAATCATCAATGGCCTTGTTTGGTGGGTTATTGGGTCAATACCAGAAGAGAAGGCTTCTCTTCACTGTAGAAGAGAGCAATAATAATAAAGGAGGCAGTAACAAAGTTAACCCCTGGCTTGAATCAATGAGAGCTTCTTCTCCTACACGAATCACACCTAACAACAACCCCTCTTGGATCGTTGGTCATCCATCTGCGCTGAAGATGTTTGATGAGATGATATGGAACTCGAAAGGGAAGCAAGTTGTTGTGTTTCTTGATTACGATGGAACTCTTTCTCCAATTGTTGCAGATCCAGAGAAAGCATTCATGACTAAAAAGATGAGAGCAATACTAAAGGACATAGCAAGACTATTTCCCACTGCCATAGTAACCGGAAGGTGTATTGACAAGGTATACGATTTTGTAAGATTGGGAGAAGTGTACTATGCTGGAAGTCACGGTATGGACATCAAAGGACCAACAAAAAGCCGCAATCATCAGAAAGGTAACAATAATGAAGCATTAGTGCTCTTCCAACCTGCGAGTCAATTCTTGCCCATGATCAACGAGGTGTACAAGATCTTGGTAGAAAAAATGAAGGCTATCCCAGGGGCTAAAGTAGAAAACAACAAGTTTTGTCTGTCCGTGCACTTTCGATGTGTTGAAGAAAAGTGCTGGTCAGCCTTGGCGGAACAAGTTAATTCAGTGCTCAAGGAGTACCCAAAACTTAAGTTAACACATGGGAGAAAAGTTATTGAGATTCGTCCAACTATAAAATGGGACAAAGGCAAGGCTATTGAATTCTTGTTAGAGTCACTAGGCTATGCAAATTCTACCAGCGTATTTCCCATCTATATTGGTGATGATACAACTGATGAGGATGCTTTTAAGGTTCTACGTAGTAAGGGCCAAGGAATTGGGATTCTTGTTTCTCAAATTCAAAAAGAAACTAACGCTATCTACACTTTGCATGATCCTTTAGAGGTTGGACAATTTTTAAGGCGTTTGGCAGATTGGAAAAAAAACAAGTTCTAG 1110 0.409 MKSSSQVSTNIVKLTESFSHSTVSAASSQVQKSSMALFGGLLGQYQKRRLLFTVEESNNNKGGSNKVNPWLESMRASSPTRITPNNNPSWIVGHPSALKMFDEMIWNSKGKQVVVFLDYDGTLSPIVADPEKAFMTKKMRAILKDIARLFPTAIVTGRCIDKVYDFVRLGEVYYAGSHGMDIKGPTKSRNHQKGNNNEALVLFQPASQFLPMINEVYKILVEKMKAIPGAKVENNKFCLSVHFRCVEEKCWSALAEQVNSVLKEYPKLKLTHGRKVIEIRPTIKWDKGKAIEFLLESLGYANSTSVFPIYIGDDTTDEDAFKVLRSKGQGIGILVSQIQKETNAIYTLHDPLEVGQFLRRLADWKKNKF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01931 369 TIGRFAM T6PP: trehalose-phosphatase 110 362 IPR003337 GO:0003824|GO:0005992
Aip07g01931 369 Pfam Trehalose-phosphatase 116 350 IPR003337 GO:0003824|GO:0005992
Aip07g01931 369 Gene3D - 195 282 - -
Aip07g01931 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 9 366 - -
Aip07g01931 369 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 115 325 IPR006379 -
Aip07g01931 369 Gene3D - 115 348 IPR023214 -
Aip07g01931 369 CDD HAD_TPP 114 355 - -
Aip07g01931 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 9 366 IPR044651 GO:0004805|GO:0005992
Aip07g01931 369 SUPERFAMILY HAD-like 114 365 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01931 Aip-Chr7 52713208 52716601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01931 115 326 Trehalose Biosynthesis Gene Families AT1G23870 24.545 4.56e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01931 K01087 - gmx:100792915 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01931 07 52713208 52716601 Aip07g01931 07 52713208 52716601 ECH
Aip07g01931 07 52713208 52716601 Aip07g01931 07 52713208 52716601 PCT