Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01901 ATGAAGAGTTCAGATAAACCTCCGAAGGGGTCGAATTTAGGAACCCTAGCTGCTGAATCACCTATTGTGAACAATCGGAGTGATGCAGAATTGCAGGGGAGCCCTGCTACGCCGAATATGGATGTCAAAGCTGAAATTTCTGATGGTTACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCCACAGGATCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTCTGCAAAGAAGATTGAATGCAATGATGATGTGGGTCGTGTAATAGATGTTGTTTATAAAAGTCAACACAGTCATGATCCCCCACATAAGCCCAATTCTACAAGGGAAAGTTTGAGCAACTGGAACATTTATGCACTTACTCACTTTGATAGTTTTGGATTAGGTGATTGCTATGGTGCTTAA 414 0.4227 MKSSDKPPKGSNLGTLAAESPIVNNRSDAELQGSPATPNMDVKAEISDGYNWRKYGQKQVKSPTGSRSYYRCTHSECSAKKIECNDDVGRVIDVVYKSQHSHDPPHKPNSTRESLSNWNIYALTHFDSFGLGDCYGA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01901 137 Pfam WRKY DNA -binding domain 48 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01901 137 Gene3D WRKY domain 36 106 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01901 137 MobiDBLite consensus disorder prediction 1 42 - -
Aip07g01901 137 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 116 IPR044810 GO:0003700
Aip07g01901 137 SUPERFAMILY WRKY DNA-binding domain 46 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01901 137 SMART WRKY_cls 46 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01901 137 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 31 116 - -
Aip07g01901 137 ProSiteProfiles WRKY domain profile. 41 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01901 137 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01901 Aip-Chr7 47530475 47533041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01901 18 129 WRKY Transcription Factor Family AT4G30935 48.673 9.42e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g01901 WRKY 2.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01901 - - aip:110272230 226.483