Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01891 ATGGAGTCACCTGCAAATGGAGTAGTAGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTTGCACAGCAGCATGATCCTCCTTCTACATCCGGGACTCCCCGTCCTACGCGGCCTCCTTTAAGACCATCTCGGAATCATATTTATGAACTCAATTGTTCCACAGTTGGGGTTTTTGATGTACCTCTAATCACTCCAGTCCCTATTTGTAGCGAAACATGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTAGAGTATTTACTTTTGCTTGGGATCATCTACAGAGACCTTAAACCCGAGAACGTGTTGGTGAGGGAAGATGGTCATATAATGCTGTCGGATTTTGACCTCTCTCTAAGGCCTAGGGGAAGTGAGGCATTACCTGCTGGTATAGTGTCCAGTACTTCCAGCTTTGAAACGCGACCTCTATGGGATATTCCTGCCGTAAGGAAGAAGCATCATCAGCGGAGACAAGTTGCATATGTGGAAAAGGTTCACAAGGCCTAG 507 0.4556 MESPANGVVESLSEVQNSVSVAQQHDPPSTSGTPRPTRPPLRPSRNHIYELNCSTVGVFDVPLITPVPICSETWFYVAEVLLALEYLLLLGIIYRDLKPENVLVREDGHIMLSDFDLSLRPRGSEALPAGIVSSTSSFETRPLWDIPAVRKKHHQRRQVAYVEKVHKA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01891 168 SUPERFAMILY Protein kinase-like (PK-like) 72 123 IPR011009 -
Aip07g01891 168 Gene3D Transferase(Phosphotransferase) domain 1 72 119 - -
Aip07g01891 168 MobiDBLite consensus disorder prediction 9 31 - -
Aip07g01891 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01891 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Aip07g01891 168 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 75 124 - -
Aip07g01891 168 Pfam Protein kinase domain 73 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01891 168 MobiDBLite consensus disorder prediction 1 45 - -
Aip07g01891 168 PANTHER FLIPPASE KINASE 1-RELATED 75 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01891 Aip-Chr7 46787240 46789370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01891 73 120 AGC Kinase Gene Family AT2G36350 85.417 6.36e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip07g01891 Pkinase 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01891 K08286 - qlo:115952794 83.5741