Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01872 ATGGGAAGAGGCAGAGGAGTTGCGGCTCTGAAACCCACGGCGGCGGTTACGGCGGCGGAGGTAAACGGATCAGAGTCAATGCCAGTATTAAAGGAAGTTAGATACCGCGGCGCGAGGAAGAGACCGTGGGGAAGATTCGCCGCCGAAATCAGAGACCCGTTGAAGAAAGCAAGGGTTTGGCTCGGAACCTTCGATTCCGCCGAGGACGCCGCAAGCGCTTACGACGCCGCCGCAAGAACACTCCTGGGACCAAAAGCCAAGACCAATTTTTCTCGCCTCTCAGGATCCAGCCCTCAATGTAGAACTGCAGCTTCGCCAGCACCACTTGCTGCGATGGGAGATTCAACCCCTTCGCTACTGCTCTGCCGCCCTGGATGGCAACTTGCTCCTCGGCCAGAGCCATTTCCTCCATGTGCAATTTTTTTGAATATGTCGCTGAATTGCTCTGTTCTTCATCTGAAATCTGGAATATTGGTTGAAAATGCAAAAggggattaa 498 0.5281 MGRGRGVAALKPTAAVTAAEVNGSESMPVLKEVRYRGARKRPWGRFAAEIRDPLKKARVWLGTFDSAEDAASAYDAAARTLLGPKAKTNFSRLSGSSPQCRTAASPAPLAAMGDSTPSLLLCRPGWQLAPRPEPFPPCAIFLNMSLNCSVLHLKSGILVENAKGD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01872 165 SUPERFAMILY DNA-binding domain 34 91 IPR016177 GO:0003677
Aip07g01872 165 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 101 - -
Aip07g01872 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 5 101 - -
Aip07g01872 165 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 CDD AP2 34 90 IPR001471 GO:0003700|GO:0006355
Aip07g01872 165 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01872 Aip-Chr7 45320472 45321059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01872 1 90 AP2-EREBP Transcription Factor Family AT1G50640 67.778 6.69e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip07g01872 AP2 8.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01872 K09286 - pvy:116145234 119.012