Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01850 ATGGCATGGAAACACAGAAAGCTCTTCCCAGCACAAACAAACCAAACCCAAGATTGTTCTGGGTTATGTGACCCTGCATGTCCGTACAACTGTTACACCAATTACCCTGACTACTATTTTTCACCACCACCACCACCTTCTTCCACCATTTCTGACCACTCCGGCAACCACATCTCCTCCTACTTAATCATCCTCATATCGTTATTCTCTGTCATTTTCCTTCTCATCTGTCTATACGTCGTGAAACTTAAGTGCTACGCCGCCTGGTGCAGGCGGAGGCTCGTAAACGGCTCTGTCCGCACGCAGTCGGACGACGAGTTTGTCAGTGAAAATCAAATTGATCATCCGGTGTGGCTAATAGCCACGGTTGGTTTGCAACAATCCGTTATAAATTCTATAACCGCTTGCCGGTACAGAAAGGACGACGGTTTGGTTGAAGGAATAGAGTGCTCTGTTTGCTTGAACGAGTTTCAAGAAGGGGAAACGTTGAGGCTCTTGCCCAAGTGTAGTCACGCTTTTCACATTCCGTGTATTGACACGTGGCTACGCTCTCATACAAATTGTCCTCTTTGCCGAGCTCGTATTGTTTCTAACAACAATGCAAATTCTGAAACAGGAATTTCAAATTCGATCTCAGTGGGTCAAGAAAACGGTGGTAGTGGTAACGGTTTTAGAAGGAATCCGAATCAAGAGGAATCGAGAATCGAGGGTGGATTAAGCAGCGATAATATGTTTACTAATTTCGACATGGAAAACAGTCCTGGAGCAGGAGAGGTCAGCGAGTTAGTTGAAATTGAAGGAAGATTCAGTGAGGAATCGAATTCGAAGGAGCGAGTGGATTTCGATACATGTCATAGTGTTTCTTCCCAGGTACTCATTGATCTAATTCAGGTTCGTGGGATTCCGACTGATGAGATACAAACGGAGATTGTAGCGAATTCAGAACCTGAAATTCACACGGCAGATCATATAGAAGATGGTGACAGAGTTGCAGAACGTGGATAG 1005 0.4498 MAWKHRKLFPAQTNQTQDCSGLCDPACPYNCYTNYPDYYFSPPPPPSSTISDHSGNHISSYLIILISLFSVIFLLICLYVVKLKCYAAWCRRRLVNGSVRTQSDDEFVSENQIDHPVWLIATVGLQQSVINSITACRYRKDDGLVEGIECSVCLNEFQEGETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRARIVSNNNANSETGISNSISVGQENGGSGNGFRRNPNQEESRIEGGLSSDNMFTNFDMENSPGAGEVSELVEIEGRFSEESNSKERVDFDTCHSVSSQVLIDLIQVRGIPTDEIQTEIVANSEPEIHTADHIEDGDRVAERG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01850 334 SMART ring_2 150 191 IPR001841 -
Aip07g01850 334 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 312 - -
Aip07g01850 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 202 IPR013083 -
Aip07g01850 334 MobiDBLite consensus disorder prediction 207 240 - -
Aip07g01850 334 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Aip07g01850 334 CDD RING-H2_PA-TM-RING 149 192 - -
Aip07g01850 334 Pfam Ring finger domain 149 192 IPR001841 -
Aip07g01850 334 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 312 IPR044675 -
Aip07g01850 334 SUPERFAMILY RING/U-box 138 198 - -
Aip07g01850 334 SMART FANCL_C_2 146 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01850 Aip-Chr7 43436121 43437125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01850 4 196 C3H Transcription Factor Family AT1G72220 46.847 1.50e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01850 - - aprc:113847030 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01850 07 43436121 43437125 Aip07g01850 07 43436121 43437125 ECH