Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01837 ATGACCGACCTGATCGAGTGTCATCCACCTTTAAGATGCCATCAAACTAACCACCACCGCGTCCTCTGTCTTTTTCTATCTAAACTATCACTACATGTCATCGTAACTAATAATCTGTTTGTTCAAGATGTTGGATCCTATCCACCTCATTTTCTTTTTCTTTTTCTCCTTATCTTTCACACTCCGCTTGCAACGGCACAGCAGCAGGAGTACCCATTGCCTAAGGTAAGAGGTGACAAGACCATGGTCATTGTCCTCCTCGTCCTCGTGGCCGTCTTCTTCGCCCTAGGCCTCCTCTCCATCTATATTCGCCAATGCTCCGAACGTCGGCACCGTGACCAGCTCCACCCTGCTATCCTCTCTGCCACCTACGGTGGAGGCAACAGCGGGGGGCAGCATCATGGCCTTGACATTGCGGTGGTGGACTCATTTCCAACCTTCATCTACTCCAACGTGAAGAGTCACAAGATTGGGCAGGGGGCGCTAGAATGCGCCGTGTGCCTCTGCGAGTTTCAAGATGAAGAAACGCTGCGTTTGATCCCACAATGCTGCCACGTGTTCCACTCCGACTGCATCGATGTCTGGTTCTCCTCCCACTCAACATGTCCAGTCTGCCGTGCAAATCTCACGCCAAAACCACCTCACACGTCATCACCACAATCCCTCGTTGTAAACATTTCGGATCAACCTGATACGAATCCAGTTAACAGTGAGCCAAATATCATTTCCCTGATCAATGATGGCGACCAGAACAATGCAATAATAACAGAGCCGAAGTCTCACCAGGAGAGGAGAACTATTTTTAATTTGGATGAAGAGAATGGTTCGGTTCAGTCATTTTANGTTAGTTGCAGGGTAACATTTCAAAGGGAGAGAAGCCACAAGGAGGGTTATAGGACAAGGAGTGCAAGAAGCACAGAGCCACCTTTTATTGGCATGACCAGATTTGAAAGGTTAGAGAAGGGTGAGAGCATTAAAGGAAATGAGGTTAAAGTAGATGGGGGAGAACGGTCTTTTGATCTTCTATTTCCCAAGGGCTCAAGGGATGAGAATTAG 1056 0.4792 MTDLIECHPPLRCHQTNHHRVLCLFLSKLSLHVIVTNNLFVQDVGSYPPHFLFLFLLIFHTPLATAQQQEYPLPKVRGDKTMVIVLLVLVAVFFALGLLSIYIRQCSERRHRDQLHPAILSATYGGGNSGGQHHGLDIAVVDSFPTFIYSNVKSHKIGQGALECAVCLCEFQDEETLRLIPQCCHVFHSDCIDVWFSSHSTCPVCRANLTPKPPHTSSPQSLVVNISDQPDTNPVNSEPNIISLINDGDQNNAIITEPKSHQERRTIFNLDEENGSVQSFXVSCRVTFQRERSHKEGYRTRSARSTEPPFIGMTRFERLEKGESIKGNEVKVDGGERSFDLLFPKGSRDEN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01837 351 ProSiteProfiles Zinc finger RING-type profile. 164 206 IPR001841 -
Aip07g01837 351 PANTHER RING-H2 FINGER PROTEIN ATL11 52 296 - -
Aip07g01837 351 MobiDBLite consensus disorder prediction 216 241 - -
Aip07g01837 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 212 IPR013083 -
Aip07g01837 351 SUPERFAMILY RING/U-box 148 217 - -
Aip07g01837 351 CDD RING-H2_PA-TM-RING 163 206 - -
Aip07g01837 351 Pfam Ring finger domain 163 206 IPR001841 -
Aip07g01837 351 PANTHER RING FINGER DOMAIN-CONTAINING 52 296 - -
Aip07g01837 351 SMART ring_2 164 205 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01837 Aip-Chr7 42689469 42690524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01837 53 210 Rapid Response to Elicitors AT3G05200 44.910 3.78e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01837 K10664 - gmx:100815982 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01837 07 42689469 42690524 Aip07g01837 07 42689469 42690524 ECH
Aip07g01837 07 42689469 42690524 Aip07g01840 07 42791702 42793543 PCT