Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01833 ATGCTGATCCTTGAAAATATGGATCATGGAGAACTCTCAAACGGTTTCCCTCATCATCAGAATCAGAATCCAACTACTACTCCTCCTCCTCCTTCTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCGGAAGCGGAAGTAATAGCCTTATCACCAAAGACTCTAATGGCTACAAACAGGTTCTTGTGTGAAACCTGTGGGAAGGGTTTCCAAAGGGATCAAAACCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTAAAACAAAGAACAAATAAAGAACCAAAGAAGCGTGTATACGTGTGTCCGGAGAAAACATGTGTCCACAACCACCCTTCAAGGGCTTTGGGAGACTTGACCGGAATCAAGAAGCACTTTTGCCGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAATGCTCGAAGCGTTACGCGGTTCAGTCCGATTGGAAAGCCCACTCCAAAACCTGTGGTACAAGAGAATACAAGTGTGATTGTGGAACCATCTTTTCACGGAGGGATAGCTTCATAACTCACAGGGCATTTTGTGATGCATTGGCAGAAGAAACAGCTAGGGTAAATGCAGCATCAAGCATAAACAACTCAACATTAGGGGCTAATAATAATAGCAATAACATTATTGGTTACAATAACATGATAGGAACCTCCATGGCCCCTCATCATAATAATAATAATAACATGGCAACCCAATTTGCTTCAATTTGCAATAAGCCAATTCCATTCCCTGAAGAAGCCAGAAATAACCAAACAACAACAAGAGGATTATCCCTTTGGATGGACCATCATCATCATCATCGTCAAGAAGCAACGATGGCCACTAATAACAATAATTACCATCTGAACTGGGTATTCGGATCGAAAATTTCGACCAATCCAAGCCAAGATCTAAGTAGCGATACTACTATTACTAGTACTACTACTACATCGCTTCCAATACTAGGAAGCATTGTTAGTGTTCCTTCATTGTATAGCTCACAACATCAACCCCATCAAACATGTGCTTCTTCTTCGTCGGCAAACATGTCGGCGACGGCATTGTTGCAGAAAGCCGCTCAAGTTGGTGCAACCTCAAGTGATCCATCATCATTCTTGGAGGCATTAGGGTTGAAATGCAGCAATGGTAGTGGTCAAGGGCAAGATGGGAATAACAATAAGTTTTGTGGGGTGTATGGTTCAAGTTTGGTGCTAACAAGTAGTAGTAATACTATTAATACAGAGCCAGAGAACAATGAATTGTCACAAATGCTCCCTTCAAAGAGGAGACATGTAATGCCGAATGAGGAGAGTGGAGGAGGGCAAACTAGGGATTTCCTTGGTGTTGGGGGTGCAAACCACCATTTGCCACCCTTCATCAACCAAAGCTTGGATTTGATTTGA 1410 0.4305 MLILENMDHGELSNGFPHHQNQNPTTTPPPPSLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEPKKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSINNSTLGANNNSNNIIGYNNMIGTSMAPHHNNNNNMATQFASICNKPIPFPEEARNNQTTTRGLSLWMDHHHHHRQEATMATNNNNYHLNWVFGSKISTNPSQDLSSDTTITSTTTTSLPILGSIVSVPSLYSSQHQPHQTCASSSSANMSATALLQKAAQVGATSSDPSSFLEALGLKCSNGSGQGQDGNNNKFCGVYGSSLVLTSSSNTINTEPENNELSQMLPSKRRHVMPNEESGGGQTRDFLGVGGANHHLPPFINQSLDLI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01833 469 MobiDBLite consensus disorder prediction 1 46 - -
Aip07g01833 469 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 33 468 - -
Aip07g01833 469 Gene3D Classic Zinc Finger 132 199 - -
Aip07g01833 469 Gene3D Classic Zinc Finger 42 116 - -
Aip07g01833 469 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Aip07g01833 469 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Aip07g01833 469 SUPERFAMILY beta-beta-alpha zinc fingers 62 159 IPR036236 -
Aip07g01833 469 PANTHER F-BOX ASSOCIATED PROTEIN 33 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01833 Aip-Chr7 42491861 42494779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01833 30 452 IDZ Gene Family AT1G03840 52.371 6.88e-140 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip07g01833 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01833 K25870 - ahf:112767274 786.178