Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01812 ATGCGACGGAGCTGTGGGGTTGAGGTGGCTGCAGTGGTTGGCGTGGCTGCTGGCTGCGGGCTGCGGGCGGCGGGGCTGGGTCAATGGAGCATAACTGTAACTCAATTTCGCTTCCGAAGAGGATCCCTCCCAATGAGAAGGTTCACGTGGTTTACGCCGTATTGCCGCCGTTTGCTCTCTTTTGCGTTTTCAGAACCTGTCGTCCATAGAGGACACTGCTTCACCGAATTATTGCCTTTTCGCCAATCGCCGTTTCTCAGTCGAGCTTTGTTCAATCGCAGTAATGTCCCAAAATCGGAGGAGTTTCTGAGTTTGAGTAAACCATTGAGATATCGATATATTCATGATGCAGCATTTTCGACATTGGTTGAGCAGGATTATTATCAAGTTCTTGGCATTTCTGAGAACGCCACTCAGGATGAGATAAAGAAGGCGTTTCTGTTGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAATAATCCATCTGCAAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACGTTGAGAGATTCTAAAAAGAGGGCCCAATATGACAAGATGCAAAGCCGTGGTTCACAGAACATAGAATATGACGACCATAATGATGATTTTGCAGAAAGGTTTCAAAATGCGAAAGAAAGGTTTCGAAATGGTTTTCACCATGAGTTTTCTTCTTCATTTCATACAGTATTCTCTGAGGTGGAGTTGTCCCTTATTTTCTCAGAAGCTGCAAGAGGGTGCACGAAACATGTGTCATTTGATGCATTCGTTCCATGTGATTATTGCGATGGGAGAGGGTATCCACCGCGTGCGAAGGCTAAAGTTTGTCCAACATGCCGGGGATTAGGTCGAGTAACAATACCTCCATTTACATCAACATGCATTACCTGTAAAGGATCAGGTCGCGTCATTAAGGATTTCTGTACGTCATGTAGAGGATCTGGGGTGGTTGAAGGGATTAAAGAGGTTAAAGTTACAATACCAGCAGGTGTGGATACTGGAGATACAATCCATGTGCCAGAGGCCGGGAATGCCGTTAAAAGTGGAGCTCGACCTGGGAGTTTATACATCAAAATCAAGGTTGCCGAGGATTCAGTCTTTGCCAGGGATGGTGCAGATATCTATGTGGACTCTAATATTAGCTTTACGCAGGCTATTCTTGGTGGCAAAGTTGATGTGCCTACTCTATCTGGGAAGATGCAAGTAAAGATACCCAAAGGTGTTCAACCAGGGCAGCTACTAGTATTACGAGGAAAAGGACTACCAAAGCATGGTTATCTTCTTGTACATCATGGGGATCAGTATGTGCGTTTTCGTATTAACTTCCCCACTAAAATTAATGAACGACAACGTGCTATACTTGAAGAACTAGCAGAGGAGGAAATAAAGCAGGAAAACCACTCAACATTTGAAGGAAACTGGCTTTACCAGCAGCTATACATCATTTCCTTGGACTTGCCAAAGACAAATCCATGGATTTGTTTTATTCTTCTACCTTGTAAAGTAGAAGATATGATATAG 1530 0.4373 MRRSCGVEVAAVVGVAAGCGLRAAGLGQWSITVTQFRFRRGSLPMRRFTWFTPYCRRLLSFAFSEPVVHRGHCFTELLPFRQSPFLSRALFNRSNVPKSEEFLSLSKPLRYRYIHDAAFSTLVEQDYYQVLGISENATQDEIKKAFLLLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQYDKMQSRGSQNIEYDDHNDDFAERFQNAKERFRNGFHHEFSSSFHTVFSEVELSLIFSEAARGCTKHVSFDAFVPCDYCDGRGYPPRAKAKVCPTCRGLGRVTIPPFTSTCITCKGSGRVIKDFCTSCRGSGVVEGIKEVKVTIPAGVDTGDTIHVPEAGNAVKSGARPGSLYIKIKVAEDSVFARDGADIYVDSNISFTQAILGGKVDVPTLSGKMQVKIPKGVQPGQLLVLRGKGLPKHGYLLVHHGDQYVRFRINFPTKINERQRAILEELAEEEIKQENHSTFEGNWLYQQLYIISLDLPKTNPWICFILLPCKVEDMI 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01812 509 PRINTS DnaJ domain signature 163 183 IPR001623 -
Aip07g01812 509 PRINTS DnaJ domain signature 128 146 IPR001623 -
Aip07g01812 509 PRINTS DnaJ domain signature 146 161 IPR001623 -
Aip07g01812 509 PRINTS DnaJ domain signature 183 202 IPR001623 -
Aip07g01812 509 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 249 320 IPR036410 -
Aip07g01812 509 Hamap Chaperone protein DnaJ [dnaJ]. 123 508 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip07g01812 509 CDD DnaJ 126 180 IPR001623 -
Aip07g01812 509 ProSitePatterns Nt-dnaJ domain signature. 168 187 IPR018253 -
Aip07g01812 509 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 89 487 - -
Aip07g01812 509 CDD DnaJ_zf 262 318 IPR001305 GO:0031072|GO:0051082
Aip07g01812 509 Gene3D DnaJ domain 123 236 IPR036869 -
Aip07g01812 509 SMART dnaj_3 125 183 IPR001623 -
Aip07g01812 509 ProSiteProfiles Zinc finger CR-type profile. 249 323 IPR001305 GO:0031072|GO:0051082
Aip07g01812 509 CDD DnaJ_C 319 449 - -
Aip07g01812 509 Gene3D - 365 476 - -
Aip07g01812 509 SUPERFAMILY HSP40/DnaJ peptide-binding domain 237 365 IPR008971 GO:0006457|GO:0051082
Aip07g01812 509 Gene3D - 258 291 - -
Aip07g01812 509 Gene3D - 292 325 - -
Aip07g01812 509 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 89 487 - -
Aip07g01812 509 SUPERFAMILY Chaperone J-domain 125 222 IPR036869 -
Aip07g01812 509 SUPERFAMILY HSP40/DnaJ peptide-binding domain 369 457 IPR008971 GO:0006457|GO:0051082
Aip07g01812 509 Pfam DnaJ C terminal domain 236 446 IPR002939 -
Aip07g01812 509 ProSiteProfiles dnaJ domain profile. 126 191 IPR001623 -
Aip07g01812 509 Gene3D - 237 363 - -
Aip07g01812 509 Pfam DnaJ domain 126 188 IPR001623 -
Aip07g01812 509 Pfam DnaJ central domain 262 318 IPR001305 GO:0031072|GO:0051082
Aip07g01812 509 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01812 Aip-Chr7 41724744 41739879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01812 127 193 C2H2 Transcription Factor Family AT1G74250 40.278 3.78e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01812 - - aip:107622493 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01812 07 41724744 41739879 Aip07g01812 07 41724744 41739879 ECH