Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01802 ATGAGAGACAGGTACATTGTTGGCGGAGGCAGAGGCGCCTCTAGACTGCTGGAGGTGAGTTTGTTGTGGGTGGAGGTGAAGCAACGTCGCCAATGGAGGAGGGGAAGCGACACAAGTGGAGGCGGCAACGACGAGGATGCTATTGGTGGAGGCAGAGGCGCCGCTAGACTGCAGGAGGCGAGCAGATTGTCGCGGGTGGAGGCGGAGATGCGGGAAAATTGTGATTATGGTGAGAGGTGTAAGTTCATTCATTCTTGGAGTTGTGGGGATAGTTTTTCTTTGCTGACTCAGCTTGAAGGCCACACCAAGGTTGTGAGTGGAATAGCTCTACCTTCTGGTTTCGACAAGCTTTATACTACATGTATTAATGAGACTCTCAGAGTTTGGGGCTACCAGTCTAGACAGTGTACTGCCGATATCAATGTTGGTGGCGAAGTAGGGTGCATGATCAATGAAGGACCTTGGATTTTTGTTGGTATACCCAATTGTACTAGAGTGCAGGATCAACCATGTACTTTGCATAGATGCCATAAATGA 537 0.4953 MRDRYIVGGGRGASRLLEVSLLWVEVKQRRQWRRGSDTSGGGNDEDAIGGGRGAARLQEASRLSRVEAEMRENCDYGERCKFIHSWSCGDSFSLLTQLEGHTKVVSGIALPSGFDKLYTTCINETLRVWGYQSRQCTADINVGGEVGCMINEGPWIFVGIPNCTRVQDQPCTLHRCHK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01802 178 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 46 165 - -
Aip07g01802 178 SUPERFAMILY WD40 repeat-like 83 150 IPR036322 GO:0005515
Aip07g01802 178 Gene3D - 77 175 IPR015943 GO:0005515
Aip07g01802 178 PANTHER - 46 165 IPR044715 -
Aip07g01802 178 MobiDBLite consensus disorder prediction 33 53 - -
Aip07g01802 178 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 139 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01802 Aip-Chr7 41007188 41009114 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip07g01802 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01802 - - lang:109352195 161.384