Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01799 ATGGAATTTGACGAGCAAGAAGAGCAAGAGGAGGAACTGGGAATACCTGAGGCACCGCAGCCGCAAGCCACGCAAGCGTGTTACGACTCACTCGGAAACTCAGCGAAACTCACTGGGGATGGAACCGCCGCGTCAGGCTTTGGACGAAAAGGAGCAGCAGCGTCGTCGGTGAGGTACCGTGAATGTCAGAAGAACCACGCCGCCGTCATCTGCGCTGCCTGCAACTGCCACCGCAACTTTCACCGCAAAGAGATCGACGGCGACATAAGAGGTGGAAGCGGCGCCGGGACCTTACACCACCACCGTCCTCAACCTCCTCCGCCGCATCTCCACCAATTCTCCCCTTACTACCACCACCGCGGTCCGCCGTACCCGGCAGGGTACCTTCACCACCTTGCAACACCTCCGATGGCTCAGCACCGTCCTCTAGCACTTCCTGCAGCGGTTTCCGGCGGTGGACTAAGCAGAGATGAGGAGGACATGTCGAACCCTAGCAGCAGCGGTGGCGGCGGCGGAGGCGGAGGTGGCGGTTGCGGAAGCGGTTCTTCAAAGAAAAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAGATGCTTGCTTTCGCTGAACAAGTTGGATGGCGGATCCAGAAGCAAGATGAAGCCATGGTTGAACAGTTCTGTGCCGAAGCTTGCGTTAAGAGGAGCGTTCTCAAGGTTTGGATGCACAATAACAAGAACACTCTTGTGACTGGTGAGAGTGGTGGTGTGAAAAGCGAGAAAGCAAATGGAAGAACAAATTAA 786 0.5611 MEFDEQEEQEEELGIPEAPQPQATQACYDSLGNSAKLTGDGTAASGFGRKGAAASSVRYRECQKNHAAVICAACNCHRNFHRKEIDGDIRGGSGAGTLHHHRPQPPPPHLHQFSPYYHHRGPPYPAGYLHHLATPPMAQHRPLALPAAVSGGGLSRDEEDMSNPSSSGGGGGGGGGGCGSGSSKKRFRTKFTQEQKDKMLAFAEQVGWRIQKQDEAMVEQFCAEACVKRSVLKVWMHNNKNTLVTGESGGVKSEKANGRTN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01799 261 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 68 244 - -
Aip07g01799 261 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 68 244 - -
Aip07g01799 261 SUPERFAMILY Homeodomain-like 171 242 IPR009057 -
Aip07g01799 261 MobiDBLite consensus disorder prediction 147 186 - -
Aip07g01799 261 Gene3D - 172 245 - -
Aip07g01799 261 MobiDBLite consensus disorder prediction 1 48 - -
Aip07g01799 261 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 184 241 IPR006455 -
Aip07g01799 261 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01799 Aip-Chr7 40696340 40698505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01799 1 243 ZF-HD Transcription Factor Family AT4G24660 41.418 1.92e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip07g01799 ZF-HD_dimer 6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01799 - - ahf:112703242 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01799 07 40696340 40698505 Aip07g01799 07 40696340 40698505 ECH
Aip07g01799 07 40696340 40698505 Aip07g01799 07 40696340 40698505 PCT