Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01798 ATGCTGCTTATACACTCATTGATTTCAAGCTATTTCATTGAGTGGGCAAAGATAGAAGCTGCAAGAGGAAGGGTCATATATTGGCAAGGGTACCGAGTTCTTAGCATTTTGGCAATGTCAAGATCCATAGATATGTATCTGCCTTTGGCATCTCTACAGCATATTTATGTCAATGTAGTTGGATTTGAAGTGATGCTAGTTACTGTAAACTTTTTCTTGATAAGGGTTATGGTTTCTAGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTACAATGGGAGAAACATGACGAGTGCCTTTTTCTAGCTAGTAATGGTTTATGGGATGTGGTGACAAATGATGAAGCCCGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGCGAGACTGCGTCAATGACCGAACAAGTTGAAGAAGCAGTTGACCCTGCAGCTCACGCTGCTACAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTTTGTAATTGTGATAGACTTGAAGGCTTAA 555 0.4126 MLLIHSLISSYFIEWAKIEAARGRVIYWQGYRVLSILAMSRSIDMYLPLASLQHIYVNVVGFEVMLVTVNFFLIRVMVSSDRYLKPCIIPEPEVKFVQWEKHDECLFLASNGLWDVVTNDEAREVARKRILLWHKKYGETASMTEQVEEAVDPAAHAATEYLSRLALQRGSKDNIFVIVIDLKA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01798 184 ProSiteProfiles PPM-type phosphatase domain profile. 1 182 IPR001932 -
Aip07g01798 184 CDD PP2Cc 16 182 IPR001932 -
Aip07g01798 184 PANTHER ALPHABET, ISOFORM E-RELATED 14 47 - -
Aip07g01798 184 PANTHER ALPHABET, ISOFORM E-RELATED 80 184 - -
Aip07g01798 184 SUPERFAMILY PP2C-like 13 183 IPR036457 -
Aip07g01798 184 Gene3D - 10 184 IPR036457 -
Aip07g01798 184 Pfam Protein phosphatase 2C 14 175 IPR001932 -
Aip07g01798 184 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 14 47 - -
Aip07g01798 184 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 80 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01798 Aip-Chr7 40618226 40618905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01798 14 183 PP2C-type Phosphatase Gene Family AT4G26080 48.851 1.52e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01798 K14497 - aip:107607045 367.466