Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01788 ATGGAAAATATTGTGATTTGGTTTCAGATACATGAAGAGGCTAGGAAGTTTGCATATCAAACAGGGGTTAAGGTGGTTGTTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTAGATTTGCTGAAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACTAGATGAGGCAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCCTCCAGGTGTAAGACAGACTATGCTATTCAGTGCCACATTTCCTAAAGAGATACAGGTTTAG 360 0.4306 MENIVIWFQIHEEARKFAYQTGVKVVVAYGGAPINHQLRDLEKGVDILVATPGRLVDLLKRARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01788 119 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 8 118 - -
Aip07g01788 119 Gene3D - 6 119 IPR027417 -
Aip07g01788 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 117 IPR027417 -
Aip07g01788 119 Pfam DEAD/DEAH box helicase 8 117 IPR011545 GO:0003676|GO:0005524
Aip07g01788 119 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 119 IPR014001 -
Aip07g01788 119 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01788 Aip-Chr7 39960916 39961870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01788 9 116 Eukaryotic Initiation Factors Gene Family AT3G13920 40.741 3.45e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01788 K11594 - aip:107607056 237.654