Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01784 ATGATGTGGGAATGGGAAGAATTAGACGACGCCGTTCCGCAAAACGACCAGCCTGATACCGATTCCTACCTCAACTTCGATCTCTTCTCTGCTCTCTCTAAGCCCAAGGATTATTATAAGATATTGGAAGTGGATTACGATGCTACGGATGATGCTATTCGTTCTAATTACATTCGTCTAGCTCTGAAATGGCACCCAGACAAGCAGAAAGACCAAGGTGCTGCCACCACGCGGTTCCAGGAGATAAACGAGGCTTATCAGGTTTTGAGTGATCCTGTAAAGAGGAGAGAATATGACAGGAATGGGATGCTTTACGCTTATGATTATGATATCATTGATTATCTTAACCGCTACAAGGGCCTTATATTGACTTGCAACGGTCTTGGAATGAAGCATTCTATATGGGCTAGTTTGATTTCATGCTTTATGTCAGAAGAAAAAAGAGCAACAGAAGTTAGATATCTATATCTTGTAGCATCAAATGCTCGCCCTCCTTGTACATGCTTTACTGTGTATGTGTTAAATGACTTAATGCGCATCAGCTCACTCCACCACCTCGACCTCTCCCTTAGCCACTTCAAGGGTGGTTTTCAGCAACACAGGGTCCTCCATTTACACTCCATTGAGCTCTGGGCTGACGTAGTTGATGTCCACGTTGCCCTTCACAGCGTACAACACGTTAATTTGAGTGCAAACCTGCTCTACGACGACCTCTCTCTTTCTGCCGAAAATGTCTCCTCTGTTGCCTACACCTTGCATTTCTTGAACCTCAACATAACGTTCTCAATGGTCCTTTCTTTGGTGGGGAATACATTAAGCTATTTTTTGGATCTTCAAAGTGTTGGATTTGGGCGATAA 858 0.4371 MMWEWEELDDAVPQNDQPDTDSYLNFDLFSALSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQGAATTRFQEINEAYQVLSDPVKRREYDRNGMLYAYDYDIIDYLNRYKGLILTCNGLGMKHSIWASLISCFMSEEKRATEVRYLYLVASNARPPCTCFTVYVLNDLMRISSLHHLDLSLSHFKGGFQQHRVLHLHSIELWADVVDVHVALHSVQHVNLSANLLYDDLSLSAENVSSVAYTLHFLNLNITFSMVLSLVGNTLSYFLDLQSVGFGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01784 285 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Aip07g01784 285 PRINTS DnaJ domain signature 39 57 IPR001623 -
Aip07g01784 285 PRINTS DnaJ domain signature 57 72 IPR001623 -
Aip07g01784 285 PRINTS DnaJ domain signature 74 94 IPR001623 -
Aip07g01784 285 SUPERFAMILY Chaperone J-domain 33 126 IPR036869 -
Aip07g01784 285 Gene3D DnaJ domain 29 110 IPR036869 -
Aip07g01784 285 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Aip07g01784 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 135 - -
Aip07g01784 285 SMART dnaj_3 36 94 IPR001623 -
Aip07g01784 285 CDD DnaJ 37 91 IPR001623 -
Aip07g01784 285 Pfam DnaJ domain 37 99 IPR001623 -
Aip07g01784 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01784 Aip-Chr7 39633476 39640236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01784 30 106 C2H2 Transcription Factor Family AT1G74250 44.048 2.65e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01784 - - var:108338470 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01784 07 39633476 39640236 Aip07g01784 07 39633476 39640236 ECH