Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01779 ATGGCTTGTGTGAAATTGGGTTCCGAACCTGATGCTTTCCAATGTCAAAGGCAAACATGGTTCTGCACAACTGGGCTTCCCAGTGACATTGTTGTCGAAGTGGGTGAAATGTCCTTCCATCTTCACATGTTCCCTTTGCTCTCTAAAAGTGGGGTTTTGGAGAGACTGATTGCAGAAGCTTCTGAGTCTAAGGAAGAATGTGTCATACACCTACCTGGCATTCCTAGTGGGGCCAAGACATTTGAACTTGTCGCAAAATTCTGCTATGGTGTGAAACTTGAACTTAAAGCTTCAAATGTTGTGTACCTCTGGTGCGCTGCTGAGAATCGTGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCACAAGCTGAAACCTTTTTCAATCAAGTAGTCCTCCGAAATTGGAAAGACTCTCTCAGAGCGCTTCAAACCTGTGATGATGTTCTACCATATGCTGACGAGCTGATTATATTTATGGAATATTTTTCAGCACTTGCTTTCTGA 510 0.4255 MACVKLGSEPDAFQCQRQTWFCTTGLPSDIVVEVGEMSFHLHMFPLLSKSGVLERLIAEASESKEECVIHLPGIPSGAKTFELVAKFCYGVKLELKASNVVYLWCAAENREMTEEYGEGNLISQAETFFNQVVLRNWKDSLRALQTCDDVLPYADELIIFMEYFSALAF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01779 169 SUPERFAMILY POZ domain 16 114 IPR011333 -
Aip07g01779 169 PANTHER OS12G0117600 PROTEIN 2 168 IPR043454 -
Aip07g01779 169 Gene3D Potassium Channel Kv1.1; Chain A 13 116 IPR011333 -
Aip07g01779 169 PANTHER - 2 168 - -
Aip07g01779 169 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01779 Aip-Chr7 39444638 39446191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01779 13 168 EF-hand Containing Proteins AT3G44820 44.937 3.57e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip07g01779 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01779 - - aip:107607065 346.665