Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01762 ATGCTTCCTTTTGGGGGCAGATTCTACGGGTTCGAGAGCTGGCTAGACCAACCTCACCAACACGACTCATCACCCTCTGATGGATTTTTTGTTCCCGAAGCACCTTTCAAGGCAACGGATCTATTATTCGACGGAGCAGGCAGATCATCCAAACTGGATAATAATAGGAAATCAACGGAAGCCTGCAAGAGCCACAGGGAAGCCGAGAGGAGGCGCAGGCAGCGAATCAACGCTCATCTTTCCACCCTTCGCTCCCTCCTCCCTAACACCGCCAAGGCAGATAAGGCGTCGTTGCTGGCGGAAGTGGTAAAGCACGTGAAGCGGCTAAAGAAAGAGGCCGATGACGTGGCACGAGACCCGTCCAAACCCGACGCCGAAGCAGAACCGTGGCCGTTTCCGGGAGAATCCGACGAGGCAACACTCAGCTACTGCGACGGAGAACCGAACCTGGTGAAGGCGACGCTGTGCTGCGAGGACCGGCCCGGTCTGAACCGGGACCTGACGCATGCGATTCGGTCAGTTCGAGCGAAAGCGGTTCGGGCCGAGATGATGACGGTTGGGGGCCGGACCAAGAGTGCGGTGGTAATTCAATGGCCAGCAGCGTCTGGTGGTGGTGATTCAAAAGAAGGGGTGGAGGTTGGAGCTCTGGAACGGGCATTGAAGGCAGTTATTGAGAATCGGGCTTTAGTGGGATCTGGGATGGGCCGCTTCGTGTTGGGTCAGAAGCGGGCTTGGAATAGTTATGATTCCCCTGATGAGGTTGATTGCACCTTTTTGCTTAACAGAGATGCTAGCAAGTAA 801 0.5556 MLPFGGRFYGFESWLDQPHQHDSSPSDGFFVPEAPFKATDLLFDGAGRSSKLDNNRKSTEACKSHREAERRRRQRINAHLSTLRSLLPNTAKADKASLLAEVVKHVKRLKKEADDVARDPSKPDAEAEPWPFPGESDEATLSYCDGEPNLVKATLCCEDRPGLNRDLTHAIRSVRAKAVRAEMMTVGGRTKSAVVIQWPAASGGGDSKEGVEVGALERALKAVIENRALVGSGMGRFVLGQKRAWNSYDSPDEVDCTFLLNRDASK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01762 266 MobiDBLite consensus disorder prediction 50 71 - -
Aip07g01762 266 MobiDBLite consensus disorder prediction 47 71 - -
Aip07g01762 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 119 IPR036638 GO:0046983
Aip07g01762 266 PANTHER TRANSCRIPTION FACTOR BHLH30 52 245 IPR045847 GO:0003700|GO:0006355
Aip07g01762 266 Pfam Helix-loop-helix DNA-binding domain 62 109 IPR011598 GO:0046983
Aip07g01762 266 MobiDBLite consensus disorder prediction 112 133 - -
Aip07g01762 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
Aip07g01762 266 PANTHER OS09G0463900 PROTEIN 52 245 - -
Aip07g01762 266 Gene3D - 54 117 IPR036638 GO:0046983
Aip07g01762 266 Coils Coil 99 119 - -
Aip07g01762 266 SMART finulus 66 115 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01762 Aip-Chr7 38309957 38311071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01762 57 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.402 8.25e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip07g01762 HLH 9.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01762 - - aip:107608273 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01762 07 38309957 38311071 Aip07g01762 07 38309957 38311071 ECH