Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01758 ATGCAAACGGCAACGAGAGCAGAAGCCGAACGTCTACTCGGGATCGCAGAAAAGCTCCTGCACACCCGCGATCTCAACGGCTCCCGCGAATTCGCCATCCTCGCCCAAGAAACCGAACCTCTTCTAGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTCCTCTTAGCCGCTGATAACCGTCCAAACGCCGCCACCAGCCACCCCCACCACCACCAACTCGATTGGTACGGCATCCTCCAGGTGGACCGCCGCACCAACGACCTCGACCTCATCAAGCGCAACTACCGCCGCCTCGCTCTCCTCCTCCACCCTGACAAGAGCCGCTTTGCGTACGCCGACCACGCCTTTAAGCTCGTCGCCGACGCCTGGGCGGTGCTCTCGGACCCAATCAAGAAGTCCAACTACGACAAGGAGCTCTCTTTCTTCTCCCGAGGGCAAAACAGATCGGGAAATTTCTGGACCGCGTGTCCGTACTGCTATAGGTTGTATGAGTACCCTAGGGTTTACGAGGGATGCTGCTTGAGGTGCCAGAATTGTGACAGGTCCTTCCATGGGATCTCGATTCCTTCGCTGCCCCCACTGGTGCCGGGGCAGGATGCCTATTACTGCTGCTGGGGGTTCTTTCCGATGGGGTTTGTGGTTGGGAATGTGGGATCT 660 0.5848 MQTATRAEAERLLGIAEKLLHTRDLNGSREFAILAQETEPLLEGSDQILAIVDVLLAADNRPNAATSHPHHHQLDWYGILQVDRRTNDLDLIKRNYRRLALLLHPDKSRFAYADHAFKLVADAWAVLSDPIKKSNYDKELSFFSRGQNRSGNFWTACPYCYRLYEYPRVYEGCCLRCQNCDRSFHGISIPSLPPLVPGQDAYYCCWGFFPMGFVVGNVGS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01758 220 Pfam DnaJ domain 75 137 IPR001623 -
Aip07g01758 220 PRINTS DnaJ domain signature 112 132 IPR001623 -
Aip07g01758 220 PRINTS DnaJ domain signature 77 95 IPR001623 -
Aip07g01758 220 PRINTS DnaJ domain signature 96 111 IPR001623 -
Aip07g01758 220 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 147 217 - -
Aip07g01758 220 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 147 - -
Aip07g01758 220 Gene3D DnaJ domain 61 154 IPR036869 -
Aip07g01758 220 SUPERFAMILY Chaperone J-domain 67 141 IPR036869 -
Aip07g01758 220 CDD DnaJ 75 129 IPR001623 -
Aip07g01758 220 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Aip07g01758 220 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 147 - -
Aip07g01758 220 SMART dnaj_3 74 132 IPR001623 -
Aip07g01758 220 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
Aip07g01758 220 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 147 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01758 Aip-Chr7 37935674 37936555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01758 5 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 60.345 4.52e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01758 - - gmx:100816918 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01758 07 37935674 37936555 Aip07g01758 07 37935674 37936555 ECH
Aip07g01758 07 37935674 37936555 Aip07g03299 07 122102809 122103559 PCT