Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01717 ATGGCTTCTTCTCTCACGGGAAAATCTAGAGAGGTTTCATCCCGGATCCCTGACAGTCGCGAACCTCGGCCAAGTGTTGGTGGTAGGAATTTCAAGGTCCTTATGGAAAATGAACGGATTAAAGTTGGCAATGTGCTCATGAAATCTGTGAGAGAAGCAGGTGCAACTTCGAGAAAGAGTGCTACAGTAGCTGGTAATCCTAAGGGAGGCTTCAAAAGTATGGATAAAAGCAATAGCAAATATGTTACTTCTGCAAATACAAATGTGAGAAAGGCATTGGCTGATGTTAGTAATGTTCAAGGAAACTCTGCAACAAATATTGGACGTGACAGCTCCAAAATGAAGGGTTTAGCAGGTTCAAACATTAAAAAAGGGGGTGGTATCACCTTGAGGAAATCCTTCACGGGAATACTGCAAAGAAATAGAAGCAATGATGTCCAGTCAGATGCTCCAAAGAAAGAACCAGGCACAGATGTGAGACCAGCTTCAAAGGATCAGAAGTATAATTCACATGGAGGCCCATCAGTTGTCACAAAAGACAGGTTTGCCAAGAAGCCTATATTACCTACAAATCCAAGTAATTCAAGGAAGTCCTTACCAATACCAAGGAAGTCCTTACCAGCACCAAGGAAGGTATACAGAGCAGATGAAAGTGCTGGAAGTTCTGAAACAGCAAAGGCACGAAGTTCTCTCCCCTCTAAGGCAACAGCAAGTAGAAGAGTTAGTTCCCAGCTAACTAATGCAAGAAACAATGTGCGGAAGATACGAGTGAGTGATGGCTTTACTCAAACGAGTCAATCCAAAGTTTTATATGGATCTTCAAGGAAGTACATCATGCCTCTTAAGACTAAAGTCATCGCTTCTACTGATCACATGACTTTAAAACCTAAATGCATATCAGGTCAGAACATATCACAATCAAATGCTGCAATATTGTCTCAGGATGAGGAAGCACTTCCATTACCTCTTCCAGTGAATGGTTTAGCATCAGTTTCCAATGATGCAAATCAAGGATGTGTTCCATCTGATGGAGAGAAAAATTTGGGAGTACATTTGCCAGAACTCATTCTAATGAAAAAGTCAAGACGCAAAAAATCTTATACTAGTTCATTGATGGAAGGATCTAAGCTTCTCAAGCAAACGTGTGAAGTTAGCCAGCAGGATAACCTACCAAATATAGACAATGATTGCAATCATTTAGAAGTACCTGAATATGTTGATGACATATATCAGTACTATTGGGTTAGTGAGGCGCAAAATCCATCTTTGGCAAATTACATGTGCATTCAGACAGAAATTACACCTTATATGCGGGGCATTTTGATCAACTGGTTGATTGAAGTACACATGAAGTTTGATTTGATGCCAGAAACACTATATCTCACAGTTACATTATTAGATCAATATCTTTCCATGGTGAAAATAGAAAAGACAGATATGCAATTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAATACGAGGACTTTTGGCATCCTAGAGTCAAAGATTTAATAAGCATCTCGGCTGAGTCATATACAAGAGATCAAATGCTTGGAATGGAGAAGCTTATTCTTAGAAAATTGAAGTTTCGTTTGAATGTTCCTACTCCTTATGTTTTCTTGGTGAGGTTTCTAAAGGCTGCACAATCAGATAGTAAGCTTGAACACATGGCATTCTTTCTCATTGACCTATGCTTGGTTGAATATGAAGCTATAGCATTCAAGCCCTCATTATTATGTGCATCAGCTCTCTATGTTGCACGTTGCACTCTGCAAATTGAGCCGCCATGGACGCCATTGCTGCAGAAGCATGCACACTATGATATTTCACAAATGAGGGGTTGTGCCGAAATGATATTGAAACTCCATAAAGCTGCTAGGATTGGAAAGCTAAAGGTTACATATGAAAAGTACTCAAGAAAGGAGCTACGTTTGGTTGCAGCCGTAAGACCGTTGGATAGCCTTCCCTGA 1974 0.4017 MASSLTGKSREVSSRIPDSREPRPSVGGRNFKVLMENERIKVGNVLMKSVREAGATSRKSATVAGNPKGGFKSMDKSNSKYVTSANTNVRKALADVSNVQGNSATNIGRDSSKMKGLAGSNIKKGGGITLRKSFTGILQRNRSNDVQSDAPKKEPGTDVRPASKDQKYNSHGGPSVVTKDRFAKKPILPTNPSNSRKSLPIPRKSLPAPRKVYRADESAGSSETAKARSSLPSKATASRRVSSQLTNARNNVRKIRVSDGFTQTSQSKVLYGSSRKYIMPLKTKVIASTDHMTLKPKCISGQNISQSNAAILSQDEEALPLPLPVNGLASVSNDANQGCVPSDGEKNLGVHLPELILMKKSRRKKSYTSSLMEGSKLLKQTCEVSQQDNLPNIDNDCNHLEVPEYVDDIYQYYWVSEAQNPSLANYMCIQTEITPYMRGILINWLIEVHMKFDLMPETLYLTVTLLDQYLSMVKIEKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNVPTPYVFLVRFLKAAQSDSKLEHMAFFLIDLCLVEYEAIAFKPSLLCASALYVARCTLQIEPPWTPLLQKHAHYDISQMRGCAEMILKLHKAARIGKLKVTYEKYSRKELRLVAAVRPLDSLP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01717 657 CDD CYCLIN 534 621 IPR013763 -
Aip07g01717 657 PANTHER CYCLIN-B3-1-RELATED 170 655 - -
Aip07g01717 657 Pfam Cyclin, N-terminal domain 408 534 IPR006671 -
Aip07g01717 657 CDD CYCLIN 437 526 IPR013763 -
Aip07g01717 657 MobiDBLite consensus disorder prediction 52 78 - -
Aip07g01717 657 SMART cyclin_7 540 622 IPR013763 -
Aip07g01717 657 SMART cyclin_7 443 527 IPR013763 -
Aip07g01717 657 MobiDBLite consensus disorder prediction 102 250 - -
Aip07g01717 657 MobiDBLite consensus disorder prediction 222 250 - -
Aip07g01717 657 Gene3D - 422 528 - -
Aip07g01717 657 SMART Cyclin_C_2 536 653 IPR004367 -
Aip07g01717 657 SUPERFAMILY Cyclin-like 398 534 IPR036915 -
Aip07g01717 657 Pfam Cyclin, C-terminal domain 536 648 IPR004367 -
Aip07g01717 657 SUPERFAMILY Cyclin-like 535 655 IPR036915 -
Aip07g01717 657 MobiDBLite consensus disorder prediction 146 165 - -
Aip07g01717 657 PANTHER CYCLINS 170 655 IPR039361 -
Aip07g01717 657 Gene3D - 529 656 - -
Aip07g01717 657 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01717 Aip-Chr7 35745300 35753403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01717 26 657 Core Cell Cycle Gene Families AT1G16330 41.475 1.17e-155 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01717 K21777 - gmx:100808850 713.375