Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01652 ATGGAAGAGGTGTTGAATTCAATTAGCCATGGTTGCGAATTAGCGAAGAAAATAGAATCGGAGCAACTACCAAATATGGCCAATATCCAACCTGATATATTGGTTTCTTCTATTGATGAAGTTGTGAAGGCATTCAATGGTGCAAAGGAGAAGCTGTTGATGACTATGGTGAATAACAATTTGATCGGAGCATCTTCTTCTTCTTCTTCTTCTTCATTTGCTCCATTGTTCAATATGCATGAAACTCAACAACAAATGGGTGCATGCGCAAGTTCTTTCTCAAGTATGATGCAAGAATGGATGATGAAGTCTTCTTCTTCTACAAGCTATGCACACACAATGGATCAGGTTTTGTTGCAAATGCAGCATCATCAACGTCAACCACAAGGATTCCCTTTGATAGGTGGCGCTGGTGGCGGCGGAGATCTTCAGCAGTTAAGAAATGTTGAAGGATCATCATCTATGGAGAAATCAATGAAAGGGCTTGAGGTACAAGTTCATGCTACTCAACTATCACCTTCAAGGCCACGGAAAAGGAAGAATGATGCGGAGAAGAGAGTAGTGAATCTTCCAGCTCAACAACTTGGAAACACAGAAATGCCTATGGAAGATGGATTCACTTGGAGAAAATATGGTCAGAAAGAAATACTTGGTTCTAAGTATCAAAGGAGTTATTACAGGTGCACCCATCAGAAACAATATGGATGCCCAGCAAAGAAACAAGTGCAGAAAATTGATAACAATCCAAACATATTTGAAGTAACATACGTTGGCGATCACACATGCCACATGTCATCAACAGCACCATCAACATTTCCACAGCAACTTCAACTTGATAACATTAACATAATGCCTCCCAATAATCCTCTTCAAGGAGCAGGAGGACCTAACACTTCCTCTCCTTCTTCTTCTATGTGGATGCACTCAGTTAGCCTCAGTCTCGGCGGCGGCGGCGGCGATGGCAGCAGCAGCGGTGGTGCTGGACCGTCTACTTTGAAATACGGTGTCGGCGGTGCTGATTATCTGGTGGCGGATATGGCTGATGTTATGTTTAATTCTGGGAGTAGCAGTGGGAATTGCAGTATGGAATCTCTCTTCCCTACTTCTGATGATAAATGGGATCCAAGTGAAAAGAAAACCTGA 1143 0.4261 MEEVLNSISHGCELAKKIESEQLPNMANIQPDILVSSIDEVVKAFNGAKEKLLMTMVNNNLIGASSSSSSSSFAPLFNMHETQQQMGACASSFSSMMQEWMMKSSSSTSYAHTMDQVLLQMQHHQRQPQGFPLIGGAGGGGDLQQLRNVEGSSSMEKSMKGLEVQVHATQLSPSRPRKRKNDAEKRVVNLPAQQLGNTEMPMEDGFTWRKYGQKEILGSKYQRSYYRCTHQKQYGCPAKKQVQKIDNNPNIFEVTYVGDHTCHMSSTAPSTFPQQLQLDNINIMPPNNPLQGAGGPNTSSPSSSMWMHSVSLSLGGGGGDGSSSGGAGPSTLKYGVGGADYLVADMADVMFNSGSSSGNCSMESLFPTSDDKWDPSEKKT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01652 380 Pfam WRKY DNA -binding domain 203 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01652 380 SUPERFAMILY WRKY DNA-binding domain 199 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01652 380 SMART WRKY_cls 202 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01652 380 MobiDBLite consensus disorder prediction 285 311 - -
Aip07g01652 380 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 297 - -
Aip07g01652 380 Gene3D WRKY domain 181 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01652 380 MobiDBLite consensus disorder prediction 355 380 - -
Aip07g01652 380 MobiDBLite consensus disorder prediction 285 310 - -
Aip07g01652 380 MobiDBLite consensus disorder prediction 166 185 - -
Aip07g01652 380 ProSiteProfiles WRKY domain profile. 197 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01652 380 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 297 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01652 Aip-Chr7 32146010 32150146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01652 1 370 WRKY Transcription Factor Family AT2G40740 34.595 2.63e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g01652 WRKY 7.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01652 - - aip:107607129 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01652 07 32146010 32150146 Aip07g01652 07 32146010 32150146 ECH