Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01650 ATGCTGCGACATCCAAACGTGGCCTCCACACTAAGGAGCAGAACAACACTGTCGCTACCTCCGCCAACAATGCTCTCGCCGTCGCCGCCGCCTTCCGCCGCGTCTCCCACCAAAACAACGCTTCCATCCTCCCTCTCCACCGCACCTTCCAAGCCCTCATTCCACCACTTCCCTATCTCTTCCACATCTTCGAACTCTCACACACTTCACAGCATAATGACCCGTTCCAATTCCAAGTGTTTCTTCTCCTCCGGGAACACCACAACACCGATTGCCATATCGGAAATGACCCGAACCGAAAATCCGGAACCCGAATCCGACGTGGATGAATCTCTGGTGGTGGTTTCGTTCTACAAGTTCGCGGATTTCTCTGACCATGCAGCTATGAGGAAACCCTTGAAGGAGCTTTGCCAACAACTTCGTGTTTCAGGCGGTATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGCATTCGGGAGTCGGTGGAGAAAGTTCTTGCATTCATACAAAGTGATGACCGATTGAAAGGGCTAAGACGGGTTGAATCGCCTGTTAGTCCCGAGGAGGAAGCCATTCACCATGGACACAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGGTGGGATCATGTGAGGGTCAAATTGAAGAAAGAGATTGTCACTCTTGGGATGCCTAGCATATCACCTATTGAAAAGGTTGGGAAATATGTTGGCCCGAAAGAGTGGAATGCTTTGATTAGTGATCCAGATACGGTTGTGATTGATGTGAGGAATAACTACGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCATGTACTTCATCATTCCGAGAATTCCCCTCTTGGGTGGAGGAGCATTTCCAGCTTACTGGATGTGGGCTTCCGGAAGTTGAGGTAGACAATTCAATCAAAAGTGATGAAAGTGAAATGGAGAATCCAAAACAAAATATGCCAAAACGTGTCGCAATGTATTGCACTGGAGGTATCCGATGCGAGAAAGCAACAAGTCTACTTCTCAGAAAAGGTTTCAAAGAGGTCTATCACCTTGAAGGTGGAATCCTGAAATATCTCGAGGAAGTTCCAGAGAAACAGAGCCTCTGGGACGGTGAGTGCTTTGTCTTCGACAAGCGAGTCTCCGTTGAGCATGGATTGGTGCCAGGAAACTTCAAGCTCTGCTATGGTTGCAAGCAGCCTGTGAGTGATGCTGACATGGAATCCCCTGAGTATGAATATGGAGTTTCTTGTCCTTACTGCTTTTCGTCGAAATCAGAAGAAGAGAAGGAGAGGGCTCGTGCGCGACAACGACAATTTGAGAGGTGGGGAATCATAGGTGGTCCGGATAAGGGTCGCCGACCATCAAGTAAACCGGACAGTGGCTGTGCAAAACCAAACCAGCTTTCACGTTCTGTTTAA 1437 0.4864 MLRHPNVASTLRSRTTLSLPPPTMLSPSPPPSAASPTKTTLPSSLSTAPSKPSFHHFPISSTSSNSHTLHSIMTRSNSKCFFSSGNTTTPIAISEMTRTENPEPESDVDESLVVVSFYKFADFSDHAAMRKPLKELCQQLRVSGGIILAPEGINGSICGIRESVEKVLAFIQSDDRLKGLRRVESPVSPEEEAIHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPSISPIEKVGKYVGPKEWNALISDPDTVVIDVRNNYETRIGKFKGAVDPCTSSFREFPSWVEEHFQLTGCGLPEVEVDNSIKSDESEMENPKQNMPKRVAMYCTGGIRCEKATSLLLRKGFKEVYHLEGGILKYLEEVPEKQSLWDGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMESPEYEYGVSCPYCFSSKSEEEKERARARQRQFERWGIIGGPDKGRRPSSKPDSGCAKPNQLSRSV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01650 478 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 222 399 IPR036873 -
Aip07g01650 478 MobiDBLite consensus disorder prediction 1 67 - -
Aip07g01650 478 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 108 459 - -
Aip07g01650 478 Pfam Rhodanese-like domain 245 366 IPR001763 -
Aip07g01650 478 ProSiteProfiles Rhodanese domain profile. 253 373 IPR001763 -
Aip07g01650 478 Gene3D - 227 406 IPR036873 -
Aip07g01650 478 SMART rhod_4 243 370 IPR001763 -
Aip07g01650 478 MobiDBLite consensus disorder prediction 37 67 - -
Aip07g01650 478 MobiDBLite consensus disorder prediction 437 478 - -
Aip07g01650 478 Pfam UPF0176 acylphosphatase like domain 113 225 IPR040503 -
Aip07g01650 478 Hamap tRNA uridine(34) hydroxylase [trhO]. 110 410 IPR020936 -
Aip07g01650 478 MobiDBLite consensus disorder prediction 22 36 - -
Aip07g01650 478 CDD RHOD_YceA 240 366 - -
Aip07g01650 478 Gene3D - 100 226 - -
Aip07g01650 478 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 108 459 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01650 Aip-Chr7 31990616 31994227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01650 111 472 Sulfurtransferasese or Rhodanese AT2G40760 77.112 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01650 - - gmx:100784854 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01650 07 31990616 31994227 Aip07g01650 07 31990616 31994227 ECH