Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01643 ATGTATAGCTTCCATTCTCCTCAATCTATCACAGAAAACCTAATCTTCATGTATTTGGGAAATTTTGCTGCATCTGCTGTTTCCTGTGAACCGGGAAGCAACAACAATTTCTTTTTCTGGATTTTGCCATGGTTTTCGCTCGACACAAGCCATTCCTTCAATTGGGAATTTGGTAGTTGCAACAAGTTCAAGTGGAAAGAGAAGGAGTATAGAGAAGCAAAGGAAGAACTTGAGTATTCAGTTAATGATGATGCTGTAAAGGAAAATAATTTAGAATCTAATGATTGTTGCATGAATTATCAGAGTATTGGAGTTGAGGATTTTGAAGTTTTGAAGGTTGTTGGTCAAGGTGCTTTTGGTAAGGTGTACCAGGTAAGGAGGACCGGTACTTCGGAAATATATGCGATGAAGGTGATGCACAAGGATAAGATTGTGCAAAAAAATCATGCAGAATATATAAAATCTGAAAGAGATATATTGACAAAGGTGGTACACCCTTTTATTGTGCGGCTCAGATACTCATTCCAAACAAAATATAGGCTATACTTGGTGCTTGATTTTGTCAATGGTGGTCATGTTTTCTTTCATCTCTATCGCCAAGGTCTATTCAGGGAGGATTTGGCACGCTTCTATGCTGGAGAGATTGTTTGTGCTGTTTCTCATCTTCATGCAAATGGTATAATGCACAGGGATCTTAAACCTGAAAATATTCTTCTCGATGCAGATGGTCATCTAGTGTTAACGGATTTTGGCCTGGCTAAGGAATTCACTGAGAGCGCAAGGTCAAATTCTATGTGCGGAACTTTAGAGTACATAGCTCCTGAAATCTTTATAGGGAAGGGTCATGATAAGGCAGCAGATTGGTGGAGTGTGGGGATTTTGCTATTTGAAATGCTTACAGGGAAAGTTAGTATCCTTGGTGTGTTTGCATCATCTATTAGTAAGAAATAG 951 0.388 MYSFHSPQSITENLIFMYLGNFAASAVSCEPGSNNNFFFWILPWFSLDTSHSFNWEFGSCNKFKWKEKEYREAKEELEYSVNDDAVKENNLESNDCCMNYQSIGVEDFEVLKVVGQGAFGKVYQVRRTGTSEIYAMKVMHKDKIVQKNHAEYIKSERDILTKVVHPFIVRLRYSFQTKYRLYLVLDFVNGGHVFFHLYRQGLFREDLARFYAGEIVCAVSHLHANGIMHRDLKPENILLDADGHLVLTDFGLAKEFTESARSNSMCGTLEYIAPEIFIGKGHDKAADWWSVGILLFEMLTGKVSILGVFASSISKK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01643 316 Gene3D Transferase(Phosphotransferase) domain 1 192 303 - -
Aip07g01643 316 CDD STKc_AGC 114 302 IPR045270 GO:0004674|GO:0005524
Aip07g01643 316 Gene3D Phosphorylase Kinase; domain 1 106 191 - -
Aip07g01643 316 SUPERFAMILY Protein kinase-like (PK-like) 99 304 IPR011009 -
Aip07g01643 316 SMART serkin_6 108 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01643 316 PANTHER RIBOSOMAL PROTEIN S6 KINASE 73 313 - -
Aip07g01643 316 ProSiteProfiles Protein kinase domain profile. 108 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01643 316 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 73 313 - -
Aip07g01643 316 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Aip07g01643 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Aip07g01643 316 Pfam Protein kinase domain 108 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01643 Aip-Chr7 31424906 31429170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01643 74 307 AGC Kinase Gene Family AT3G08720 75.214 7.22e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Aip07g01643 Pkinase 6.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01643 K04688 - gmx:100803509 378.252