Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01606 ATGCCTGCAATTGCTGATCCTAACACCCACAAGCGCAAGTTAAGATCTTACGCGCCGCCACGCGCCGAATCTCCTTCCCCTTCCCCACCGAAATGGAAGTCGCCCCGCCCATCTGCTATTGCCAGCCCCCATTCTGCTGCAAATGGTAATGAAATTGTTGCTGATGAAAATCAAGGTGTATTGCGGAAACCTGACCTTGTGAAATCCCTTTGGAATCTGAAAGATGGTGAGCAATTGAGAGTGGTGAAGGAGGCATTGCACCTTGCAACTGCACCTTCTGCGGTTGTGTGTCGAGAAGAGGAGCAGGATATGGTTTTGGGGTTCTGCAAATCCTGCATTGAGCATGAGAAGGCTGGGAGCTTGTACATATGCGGGTGCCCCGGAACTGGAAAATCGTTGTCTATGGAGAAAGTGAAAGAGGCTTTACTCAATTGGGCAAAAGAGGGAGGTTTTCCACTGCCAGATGTTTTGTCAGTAAATTGTACATCCCTTGCCAATACATCAGATATTTTCACCAAGATACTTGGGTTAAGCCCTTCACGGGGAAGAAGGGTTTTGGCAACACCCTTGCAACAACTTCAGAACATGTATTCACAGAAATCTTCTACCAGGAATATGATGTTGATAGTTGCTGATGAGTTAGATTACCTAATAACCAGAGACCGGGCTGTGCTCCATGACCTTTTTATGCTTACCACCTTCCCATTTGCCAGATGTATATTAATAGGGGTAGCAAATGCTATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCTCTAAATTGCAAGCCTACTGTTGTAACTTTTCGTGCCTACTCTAAAGATCAAATCCTTAGGATTCTTGAAGAAAGGCTAAATGAACTTCCTTACACTGTCTTTCAACGTCAAGCACTAGAACTATGTGCTAGGATTATACTTTGCTCGTCCATGAAACATTTCTGTGGATCTAAGAAAGATACAATCCTTGGAGAGCTGTATAAATCTTACTCTGAGTTATGCAAATCATCATTGATTCCCCCAACAGGAATCTTGGAATTCTCAAACATGTGCAGAGTGCTTAATGACCAGGGGCTCATTAAACTAGGACCATCACGAGAGGATAAATTGAAAAGGGTAACACCAAAAGTTGACGAGGCTGATATTACATTTGCATTGCAGGGAATCCGATTTTTTAGAAATTATAAAAGATTATTTCATTATATATGA 1209 0.4293 MPAIADPNTHKRKLRSYAPPRAESPSPSPPKWKSPRPSAIASPHSAANGNEIVADENQGVLRKPDLVKSLWNLKDGEQLRVVKEALHLATAPSAVVCREEEQDMVLGFCKSCIEHEKAGSLYICGCPGTGKSLSMEKVKEALLNWAKEGGFPLPDVLSVNCTSLANTSDIFTKILGLSPSRGRRVLATPLQQLQNMYSQKSSTRNMMLIVADELDYLITRDRAVLHDLFMLTTFPFARCILIGVANAIDLADRFLPRLTSLNCKPTVVTFRAYSKDQILRILEERLNELPYTVFQRQALELCARIILCSSMKHFCGSKKDTILGELYKSYSELCKSSLIPPTGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTPKVDEADITFALQGIRFFRNYKRLFHYI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01606 402 Gene3D - 300 391 IPR036388 -
Aip07g01606 402 CDD AAA 101 259 - -
Aip07g01606 402 Pfam AAA domain 116 233 IPR003593 -
Aip07g01606 402 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 24 304 - -
Aip07g01606 402 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 305 396 - -
Aip07g01606 402 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 305 396 - -
Aip07g01606 402 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 24 304 - -
Aip07g01606 402 SUPERFAMILY "Winged helix" DNA-binding domain 298 393 IPR036390 -
Aip07g01606 402 Pfam CDC6, C terminal winged helix domain 307 385 IPR015163 -
Aip07g01606 402 SMART Cdc6_C_2 307 386 IPR015163 -
Aip07g01606 402 PIRSF Cdc6 4 304 IPR016314 GO:0006270|GO:0051301
Aip07g01606 402 PIRSF Cdc6 304 397 IPR016314 GO:0006270|GO:0051301
Aip07g01606 402 MobiDBLite consensus disorder prediction 1 45 - -
Aip07g01606 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 307 IPR027417 -
Aip07g01606 402 Gene3D - 76 270 IPR027417 -
Aip07g01606 402 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01606 Aip-Chr7 30400242 30403746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01606 297 357 Core DNA Replication Machinery Family AT1G07270 57.377 1.04e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01606 K02213 - gmx:100791200 425.246