Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g01594 | ATGCAATGTGAGCATGCATGGGGTTGTGCCAAGCTAAGGGTGTTCTACAAGAACAAAGAAGATGGTGGTAAACCTAATAGCATGGGAAGCTGCTATGATGACACAGGCTCTTCATCTCTTCCAACATTAATGGATTCTTACATCAGCTTTGACCAACAACAACAATCTCAAACCCATCTTCATGCTGATGAGTATGAGCAAGCTGCGAAGAAATCTTCTCCAACAACCGGTGGAGTGAAGAAGCCGCATCGTTTTCGCCCCGGAACTGTTGCCCTACGTTCTACATTTTTTTGTTTCAATGAGATACGAAAATACCAAAAGAGTACCGAGCTTCTGATTCGCAAGTTGCCATTCCAGCGTTTTGTTCGTGAAATTGCTCAGAACTTCAAGACGGACCTGAGGTTTCAGAGCCATGCGATTTTTGCACTTCAGGAGGCAGTGGAGTCTTATCTAGTGGGACTCTTTGAGGACACAAATTTGTGTGCGATCCACGCCAAGGGAGTTACCATTATGCCCAAGGACCTTCAGCTTGCCAGGCGTATCCGTGGCGAACGTGCTTAA | 561 | 0.4599 | MQCEHAWGCAKLRVFYKNKEDGGKPNSMGSCYDDTGSSSLPTLMDSYISFDQQQQSQTHLHADEYEQAAKKSSPTTGGVKKPHRFRPGTVALRSTFFCFNEIRKYQKSTELLIRKLPFQRFVREIAQNFKTDLRFQSHAIFALQEAVESYLVGLFEDTNLCAIHAKGVTIMPKDLQLARRIRGERA | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g01594 | 186 | Pfam | Core histone H2A/H2B/H3/H4 | 62 | 182 | IPR007125 | GO:0003677 | |
Aip07g01594 | 186 | Gene3D | Histone, subunit A | 49 | 186 | IPR009072 | GO:0046982 | |
Aip07g01594 | 186 | PANTHER | HISTONE H3 | 67 | 186 | - | - | |
Aip07g01594 | 186 | PRINTS | Histone H3 signature | 148 | 164 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | PRINTS | Histone H3 signature | 164 | 185 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | PRINTS | Histone H3 signature | 60 | 74 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | PRINTS | Histone H3 signature | 130 | 148 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | SMART | h35 | 77 | 186 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | PANTHER | HISTONE H3 | 67 | 186 | IPR000164 | GO:0000786|GO:0003677|GO:0030527 | |
Aip07g01594 | 186 | SUPERFAMILY | Histone-fold | 56 | 183 | IPR009072 | GO:0046982 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g01594 | Aip-Chr7 | 29897896 | 29900060 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g01594 | 13 | 56 | NAC Transcription Factor Family | AT1G56010 | 56.818 | 1.24e-09 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g01594 | K11253 | - | atr:18441510 | 199.904 |