Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01590 ATGGTAAGTGGTGGTGGCTGTATTAGGCCTCAAGAGGATTCACTTAATAACCCCATTGATATGGTAGTTGGTACCCCTGGAAGGATTCTTCAACATATTGAGGAGGGCATCCTAGTGTATGGCGACATCAAATACTTGGTCTTGGATGAGGCAGATACAATGTTTGATCATGGCTTTGGTCCTGATATACGCAAATTTCTGGCCCCATTGAAACATCGTGCATCAAAGTCTGATGGCCTAGGTTTTCTGACCGTCTTGGTAACCGCAACAATGACAAAGGCTGTGCAAAAGCTAATTGATGAGGAGTTTCAGGGTTCTGAGAACAAGCTGGAAGCATTACTTCAGGTACTTGTGCCAAGCCGAGCAAAAGGCAACAAGGTGATGGTTTTTTGCAATACTTTGGACTCTAACCGTGCGGTGGATCACTACCTTGTTGAAAATATGATTCCTACTATCATCTACCATTGGAAAGTACCAGCAGAGCAAAGGGGAAGTACCAGCAGAGCAAAAGTGAAGGTTGAAAACCTCAATAAATTTAAGAATGACATTGATGATCGTCCAACATTAGTTTGCACAGACTTGGCCGCTAGGGGTCTGGACTTGGATGTAGACCATGTTGTTAAGTTTGACTTCCCCTTGAACTCTATCGATTACTTTCATTGGACTGGTAGAACTGCTTGTATGGGTGAAAAGGTGAAAGTAACCAGTTTGGTTACAAAGAAGGACTTGATCTTGGCCACTAGAATAGAGGAGGCAATGAGGAAGAATGAGAGTTTGGAGGCTATCACGAAAGGAGTACGAAGGGATATCGCCAGGACCCAAGTTAATGGGCAGAGTGGGAAGGACAGAAAATTAGTTAAAGTTTCTAAAGTTAAGAACAATCCTGGTGGACGTGCCAGTTTAGGGAATAAAGGATCGGATTTGAAATCCGGAAAAGGATCATCATCAAAAAAATCTATGAAGAAATGGATTAAGGTTTCAAATTCTGTAAAATCCTCCAATGCAAATAGCTCGAGAAAAGCTTCTTCAGGGTATAAGCAAACAAGTAAAAGGACCAGTGCCACCAAATCGACAAATTCTAAACTCAGTACTATAACTAGTTGA 1104 0.4194 MVSGGGCIRPQEDSLNNPIDMVVGTPGRILQHIEEGILVYGDIKYLVLDEADTMFDHGFGPDIRKFLAPLKHRASKSDGLGFLTVLVTATMTKAVQKLIDEEFQGSENKLEALLQVLVPSRAKGNKVMVFCNTLDSNRAVDHYLVENMIPTIIYHWKVPAEQRGSTSRAKVKVENLNKFKNDIDDRPTLVCTDLAARGLDLDVDHVVKFDFPLNSIDYFHWTGRTACMGEKVKVTSLVTKKDLILATRIEEAMRKNESLEAITKGVRRDIARTQVNGQSGKDRKLVKVSKVKNNPGGRASLGNKGSDLKSGKGSSSKKSMKKWIKVSNSVKSSNANSSRKASSGYKQTSKRTSATKSTNSKLSTITS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01590 367 Pfam DEAD/DEAH box helicase 4 98 IPR011545 GO:0003676|GO:0005524
Aip07g01590 367 CDD SF2_C_DEAD 106 238 - -
Aip07g01590 367 Gene3D - 1 102 IPR027417 -
Aip07g01590 367 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 109 IPR014001 -
Aip07g01590 367 SMART helicmild6 138 229 IPR001650 -
Aip07g01590 367 Pfam Helicase conserved C-terminal domain 109 226 IPR001650 -
Aip07g01590 367 MobiDBLite consensus disorder prediction 320 367 - -
Aip07g01590 367 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 105 - -
Aip07g01590 367 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 109 270 IPR001650 -
Aip07g01590 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 249 IPR027417 -
Aip07g01590 367 MobiDBLite consensus disorder prediction 290 367 - -
Aip07g01590 367 Gene3D - 103 362 IPR027417 -
Aip07g01590 367 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 105 303 - -
Aip07g01590 367 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 1 105 - -
Aip07g01590 367 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 105 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01590 Aip-Chr7 29770653 29773440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01590 4 251 Eukaryotic Initiation Factors Gene Family AT3G19760 27.574 3.38e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01590 - - ahf:112766979 635.565