Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01575 ATGATAAAAGATTGGATAAAAAAAAGGAAGGAACAATCTGAAGATGCTGATGATAATGAACAAGAGAATGAAAATGCTTGTACTCATAAGAAGCCTCGTTTGGTGTGGGGTGAAGAGCTGCGTAGCAAATTCGAAGCTGCAGTATATCAACTTGGCCTTGATAAGGTTGTTCCTAGAAAATTTCTTGAACTGATGAATGTTGAAGGGCAAGCCATCTTTAGAAATCATTCTCCTCTTGGAGCTGCTTATGTGAGAGCAGACTCATTCGACACTGGCATCACTAGTTCACCTAATTTGCTGGATTATTATCCGTGTAGCGAAGCCACACAGATGAAAGCTAAGTTATCCAGAGTTCGTGTCAACTCTTTGCCCTCGGGTCATTCTTTCAACAATTCTCAACTGCCTCAGAGTAACTTGAAGTTTTCCTCCTCCGCTTCTCATGTTGGGAACATTATGGTTGATCTTTCTTCAAGGACTGAAGGCCTAATTGGGAATATCATAGAGGCTTCATGTAGCATCCCTCAGCAAAGTTTGGAGCAACATAAGGAGGACTTAGATGCACCCCTTTCTTCTGTTGGAGACACATGTTCCTTGGGACATGCTTCAAACCAAAATAACAACATTGGCATAAAAGAGTTGATGCATCTTTTGCCAGCCAACAGAATGAGGCTACTCCTTCATTCAACCAGAACACTGAACTTGAGGACTTCGATTCTTTGGATGACATATTAA 732 0.4126 MIKDWIKKRKEQSEDADDNEQENENACTHKKPRLVWGEELRSKFEAAVYQLGLDKVVPRKFLELMNVEGQAIFRNHSPLGAAYVRADSFDTGITSSPNLLDYYPCSEATQMKAKLSRVRVNSLPSGHSFNNSQLPQSNLKFSSSASHVGNIMVDLSSRTEGLIGNIIEASCSIPQQSLEQHKEDLDAPLSSVGDTCSLGHASNQNNNIGIKELMHLLPANRMRLLLHSTRTLNLRTSILWMTY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01575 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 69 IPR045279 GO:0009736
Aip07g01575 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 72 213 IPR045279 GO:0009736
Aip07g01575 243 MobiDBLite consensus disorder prediction 1 26 - -
Aip07g01575 243 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 31 69 IPR006447 GO:0003677
Aip07g01575 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 69 - -
Aip07g01575 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 72 213 - -
Aip07g01575 243 Gene3D - 27 76 - -
Aip07g01575 243 Coils Coil 2 22 - -
Aip07g01575 243 SUPERFAMILY Homeodomain-like 28 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01575 Aip-Chr7 29480768 29481957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01575 9 69 Response Regulator Gene Family AT4G16110 52.459 1.02e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip07g01575 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01575 - K14491 gmx:100776075 109.768