Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01574 ATGAGCTTTTCTGGAGGCACAACAGTACCGGCTTCTTTGTTTGCTCCTACAGAAATGCCTATTCTAGCTTTAGGTTATTCTAAGTTGAGTGCTACTGCATTGGCACTTCGGTTGCCATGTAACTGCATGAGAAGGATGCGTTTGGCTACAAAGCTTAAGTATTCTGTTGCTGATAGGACATCATCGGCCTCCAGTCATGTGGATTCACCAGCAGAGTCGCGTCCGGTGAGTAGGAGGCGGGGAGGTGGCTCGTCGTTATATATTCGTCCTAGTTTGTCAGTAATGAAGAAGGATAGGGAGGAGATGCGTGAAAAGGTTTATGAGTTTTTGCGGGGAATTGGCATTGTTCCTGATGAGCTAGATGGTCTTGAACTTCCTGTGACAGTTGATGTTATGAGGGAACGCATAGATTTTCTTCACAGTTTAGGACTTACAATTGAAGATATTAACAATTATCCACTTGTTCTTGGCTGCAGCGTCAAGAAGAATATGATTCCGGTGCTAGATTACCTTGGTAAATTGGGAGTCAGGAAATCCACATTCACTCAGTTTTTGAGGAGATACCCACAAGTGCTTCATGCGAGTGTGGTTGTGGATCTTGTGCCGGTGATCAAGTATCTTGAGGGGATGGATATAAAGCCAAATGATATTCCTCGGGTTCTTGAGAGGTACCCTGAAGTGCTAGGATTCAAACTTGAGGGAACCATGAGTACATCAGTTGCTTATTTGGTTGGGATTGGTGTATCCAGAAGAGAAGTTGGAGGGGTCTTAACTAGATATCCAGAGATTTTGGGGATGCGAGTTGGTAGAATCATCAAACCTTTTGTGGAATTTCTGGAAAGCTTGGGGATTCCAAGGTTAGCTGTTGCTAGGTTGATAGAGAAAAAGCCTTATATTCTTGGATTTGGGTTAGACGAGAAGGTGAAGCCCAATGTGAAGTCCCTTGAAGAGTTTAATGTCAGGCGAACATTACTTCCCTCTATAATTGCTCAATATCCTGACATAATTGGGATCGACCTAGAGCCAAAGCTTGTGAATCAGAGGAGTTTACTCAACACTGTACTTGACGTGGATCCTAATGATTTCGGAAGAATTGTTGAGAAGATGCCGCAGGTAGTTAGCCTTACCAAAGGACCTATGCTGAAACATGTTGATTTTCTTAAGGATTGTGGATTTTCTTTAGAGCAAATGAGGAAGATGATTGTTGGATGCCCTCAACTGCTTGCTTTAAACATCGACATTATGAAACTTAGCTTTGATTACTTCCAAATAGATATGAAAAGGCCTTTGGAAGACTTGGTTATTTTCCCAGCATTCTTCACGTATGGTCTGGAGTCAACTGTAAAACCAAGGCATAAGGTGATTGCTAAGAAAGGATTAAAGTGTTCTCTTTCATGGATGCTTAATTGTTCTGATGAGAAGTTTGAGCAACGAATGGAATATGACACTATTGATATGGAGGAGATGGAAACTGAACCATCATTTGATATGAATTCACTGATGCAACCAAGGAATGATGAATCGGTCTACCTGGGCAATAATAATTGCTCAACTATCGTTTTTGTATCATTGAAAAGCTATTCTCATATAACAAGGACAAAAGTGACATGTTTGGCACCCGGCAACCAACTTAGTAAAAACCCATGTGTTGGTCCCACATCTCGTCAAACGGTAGAGGGGTGTATGTTAGCTCGTTATGCAAGATAA 1707 0.4177 MSFSGGTTVPASLFAPTEMPILALGYSKLSATALALRLPCNCMRRMRLATKLKYSVADRTSSASSHVDSPAESRPVSRRRGGGSSLYIRPSLSVMKKDREEMREKVYEFLRGIGIVPDELDGLELPVTVDVMRERIDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLVPVIKYLEGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREVGGVLTRYPEILGMRVGRIIKPFVEFLESLGIPRLAVARLIEKKPYILGFGLDEKVKPNVKSLEEFNVRRTLLPSIIAQYPDIIGIDLEPKLVNQRSLLNTVLDVDPNDFGRIVEKMPQVVSLTKGPMLKHVDFLKDCGFSLEQMRKMIVGCPQLLALNIDIMKLSFDYFQIDMKRPLEDLVIFPAFFTYGLESTVKPRHKVIAKKGLKCSLSWMLNCSDEKFEQRMEYDTIDMEEMETEPSFDMNSLMQPRNDESVYLGNNNCSTIVFVSLKSYSHITRTKVTCLAPGNQLSKNPCVGPTSRQTVEGCMLARYAR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01574 568 MobiDBLite consensus disorder prediction 63 84 - -
Aip07g01574 568 Pfam mTERF 168 476 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 363 393 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 326 358 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 218 249 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 430 461 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 SMART mt_12 182 213 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 PANTHER CGI-12 PROTEIN-RELATED 44 510 IPR003690 GO:0003690|GO:0006355
Aip07g01574 568 Gene3D Transcription termination factor 3, mitochondrial 173 271 IPR038538 -
Aip07g01574 568 Gene3D Transcription termination factor 3, mitochondrial 272 485 IPR038538 -
Aip07g01574 568 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 44 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01574 Aip-Chr7 29456924 29460483 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip07g01574 mTERF 5.6e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01574 K15032 - gmx:100785223 798.505