Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01573 ATGTGGATGAATTTTGGAGCAGGTTCTGATGGCGTTAAGATAGAAATGACCTCTTTGGTGGGAATGATGACATTGACAAATAGTTGTAAAGAACAAATTTCTAGGGACGACGCTAGAACAAATTGCACCTCAAAATCCCCTTTCTTCTTTGCTTCTTTCTCACTTCTTCTTCTGTTTTCATATCAAGCAAACTTCAGGGTGCAGATTCGTTTGCTGGTGAAGGTAATCATGGTCAGCCTTCTAGACAAGATCCATGAGGAAGCTAATGAAGAATCAAAAGCCATTACAAAAGCATCTTCTATGAAAGCTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGGAGCTATAAACAGAGATGTAATGAGACGAAGATAA 414 0.3816 MWMNFGAGSDGVKIEMTSLVGMMTLTNSCKEQISRDDARTNCTSKSPFFFASFSLLLLFSYQANFRVQIRLLVKVIMVSLLDKIHEEANEESKAITKASSMKAIKKRMEKDIDEVGKIAHGVKTKIGAINRDVMRRR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01573 137 Gene3D - 68 137 - -
Aip07g01573 137 Pfam Syntaxin 80 134 IPR006011 GO:0016020
Aip07g01573 137 PANTHER SYNTAXIN 75 133 IPR045242 -
Aip07g01573 137 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 75 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01573 Aip-Chr7 29424877 29426420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01573 88 137 SNARE and Associated Proteins AT3G03800 52.000 2.11e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01573 K08486 - gmx:100807404 88.1965