Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01572 ATGGGTGCGGTGGAGGTGTTTCAACAGCAGCCGCTGGTGGTGGACGCTGCTCCGGTTTTGTCGCTGAACTCGCTGCCGTTGGGGTTCCGTTTCCGACCGACAGACGAGGAGCTCGTTGACTTTTACTTGCGGCAGAAGATCAACGGCAATGGCGATGAGGTTTGGGTCATTCGAGAAATCGATGTTTGCAAATGGGAACCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACAGGAAGTATCCAAATGGACACCGGCTGAACCGAGCAACAACTCATGGATATTGGAAGGCGACTGGCGACTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGGAATGAAGAAGACTCTTGTATTCTACACTGGCCGTGCTCCCAAAGGGAAGAGGACCAATTGGGTGATGCATGA 456 0.4846 MGAVEVFQQQPLVVDAAPVLSLNSLPLGFRFRPTDEELVDFYLRQKINGNGDEVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGDWXXXXXXXXXXXXXWNEEDSCILHWPCSQREEDQLGDA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01572 151 ProSiteProfiles NAC domain profile. 25 151 IPR003441 GO:0003677|GO:0006355
Aip07g01572 151 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 112 - -
Aip07g01572 151 Gene3D NAC domain 34 121 IPR036093 GO:0003677|GO:0006355
Aip07g01572 151 Pfam No apical meristem (NAM) protein 26 113 IPR003441 GO:0003677|GO:0006355
Aip07g01572 151 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 112 - -
Aip07g01572 151 SUPERFAMILY NAC domain 19 113 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01572 Aip-Chr7 29315912 29316688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01572 19 112 NAC Transcription Factor Family AT3G49530 71.277 9.36e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip07g01572 NAM 9.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01572 - - aip:107609038 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01571 07 29313181 29315885 Aip07g01572 07 29315912 29316688 PCT