Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01569 ATGGTCCTTCCACATCCACCTACTTCAAGGACCCTCTCTCTTAATGGTAAAGCCAGGCGGCATCTTGCAACTGTTGATGGAACTTCAACTGGTGATTCTTCAGTCATGGAGATTGCTATTGAGGATGCTATAGCAGATATTCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGCAGAGCTCGGGGAAGGAGAGAATACTCTTAAGATGGAATGCAGTTGTAAAGGTGATCTTGCACTTGCTCATCAAGACTATGCAGTAAAGTGGTTTAGTATTAAGGGCAAAAGGACTTGCGATATCTGCAAGCAGGATGTTCAAAACCTCCCGGTAACACTATTGAAAATTTATGATCGTCAACCCCCTGTCAGACAGCCACCAAATGTGCCACAACCAAGGGAAATAGCTTATTACTAA 414 0.4348 MVLPHPPTSRTLSLNGKARRHLATVDGTSTGDSSVMEIAIEDAIADIPEEEAVCRICLAELGEGENTLKMECSCKGDLALAHQDYAVKWFSIKGKRTCDICKQDVQNLPVTLLKIYDRQPPVRQPPNVPQPREIAYY 137
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01569 137 SUPERFAMILY RING/U-box 50 105 - -
Aip07g01569 137 SMART ringv_2 53 102 IPR011016 GO:0008270
Aip07g01569 137 ProSiteProfiles Zinc finger RING-CH-type profile. 46 108 IPR011016 GO:0008270
Aip07g01569 137 Pfam RING-variant domain 54 101 IPR011016 GO:0008270
Aip07g01569 137 PANTHER OS02G0165000 PROTEIN 23 136 - -
Aip07g01569 137 CDD RING_CH-C4HC3_MARCH 54 102 - -
Aip07g01569 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 41 110 IPR013083 -
Aip07g01569 137 PANTHER OS02G0165000 PROTEIN 23 136 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip07g01569 Aip-Chr7 29288363 29289442 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01569 37 108 C3H Transcription Factor Family AT2G37950 45.205 1.71e-11 57.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01569 - - ahf:112765571 223.402