Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01554 ATGAAGAAATCACCTTCAAGCAGCATCAATAAAAGTTTGCATAATCAATATAGCCAAAGAAAAGAGAATGATCGTTCTTTCTTGAAATCTTTCAAGTCTGCTTTCAGAGCTGTTTTTGCATTGTTCCTCTCCGGAAGCAAAAGAAAGACACCCTCAAAAGTTGATGAAAGAAACAACATATCAAAAGTCAGAGGAGTATCATGTAAGTCTACTTCAATTGACTCATCCAAAAGTTCATCAAAATGGAAATTTTCTAACTCCTATGCATCATCATCTAGAACTGCAAGTGGGCAACTTGAGATTGGAAACTTCACCTTTGAAGAAATCTACAAGTCAACGTCAAGATTCTCCCCGGAGAATCAGATAGGAGAAGGTGGATTTGGAACAGTTTACAAAGGTAAGCTTAACGACGGAACTCTTGTTGCCGTGAAGCGCGCCAAGAAGGTACATGATCATGACGGACCGAAACACTTGTACGAGTTCAAGAATGAAATATACACCTTGTCAAAGATTGAGCATCGGAATCTTGTGCGGCTATATGGATATTTGGAGCTTGCAGAAGAGAAGATTATTGTTGTTGAGTATGTTGGTAATGGGACCCTTCGCGATCATCTAGATGGTACTCAAGGGGATGGACTAGAAATTGCTGAGCGTCTAGACGTAGCAATTGATGTGGCTCACGCAATCACTTACCTTCACATGTACACAGATAATCCAATTATTCATAGAGACATAAAAGCATCAAACATTCTAATCACAGAGAACTTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCACGCTTGTCTGATGACCCTTCAGCAACTCATATTTCAACTCAAGTTAAAGGAACTGCTGGCTACATGGATCCTGAGTACCTAAGAACATACCAACTCACTGATAAGAGTGACGTTTATTCGTTCGGTGTTTTGCTTGTCGAAATGATGACAGGACGGCATCCCATCGAGCCCAACAGACCCCTCCAAGAGAGAGTTACAATCAGATGGGTAAGTATATCAAGTATTCGTTCTGTTTGA 1035 0.4058 MKKSPSSSINKSLHNQYSQRKENDRSFLKSFKSAFRAVFALFLSGSKRKTPSKVDERNNISKVRGVSCKSTSIDSSKSSSKWKFSNSYASSSRTASGQLEIGNFTFEEIYKSTSRFSPENQIGEGGFGTVYKGKLNDGTLVAVKRAKKVHDHDGPKHLYEFKNEIYTLSKIEHRNLVRLYGYLELAEEKIIVVEYVGNGTLRDHLDGTQGDGLEIAERLDVAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLRAKVADFGFARLSDDPSATHISTQVKGTAGYMDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPIEPNRPLQERVTIRWVSISSIRSV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01554 344 ProSitePatterns Protein kinases ATP-binding region signature. 122 148 IPR017441 GO:0005524
Aip07g01554 344 ProSiteProfiles Protein kinase domain profile. 116 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01554 344 SUPERFAMILY Protein kinase-like (PK-like) 92 336 IPR011009 -
Aip07g01554 344 PANTHER RECEPTOR-LIKE PROTEIN 55 14 335 - -
Aip07g01554 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Aip07g01554 344 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 14 335 - -
Aip07g01554 344 MobiDBLite consensus disorder prediction 1 23 - -
Aip07g01554 344 Gene3D Phosphorylase Kinase; domain 1 75 195 - -
Aip07g01554 344 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g01554 344 Gene3D Transferase(Phosphotransferase) domain 1 196 341 - -
Aip07g01554 344 SMART serkin_6 116 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01554 344 Pfam Protein kinase domain 118 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01554 Aip-Chr7 28821418 28823031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01554 87 322 Receptor kinase-like Gene Family AT1G79620 48.954 5.43e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aip07g01554 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01554 - - gmx:100788236 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01554 07 28821418 28823031 Aip07g01554 07 28821418 28823031 ECH