Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01540 ATGAAACCCACTAAAGAAGTAGCTTCTACTGCTGCAAATCTCAACATGTTGAACCATCAACAATTATTCTTGAGCGGTATGCCTCAACAACAACAACAACCGCCAGTACCACAAATTCCAGTGCAATTCCATCAACAAAGAAACATTCTTCCAATCTATCAATCCGGAGTTTGTGCAAAGAAGATGCAACAATTTGTCCATTGCCAGCAGCGCCGGACGGCCGACAACAACATTATCTTCTGGAAGAGATTTGTGGCCGAGCTTTTCGCTCCGAATGGTAAGAAGAGCTTCTGTTTCTCCTTGTATCCAAGACCAAAAACCAGAGCCAATTTGTCCCTTGGTAGTATGAAAAAATGTGATATATGCAAAAAGAATCCTGTTAATGGCTATGAAGCGTGTTTTGATGTTCTTCCAAGGCTTTTAAAGGTGAAATATGAAAGTGGACTATTGGAAGAGAGACTTTTTACCGACATTCCCAGCGAATTCAGAGACCCTTCTGGCTACATTGTTCTGGTATGTAAGAAAGCAAGAAGAGAAAGCTTGTTCGACAAGTTTCGAGTCGTCCACAAAGGTTCCATTCGAATAGTTTTCTCCCCTTACATCAAGATATGTTCTTGGGAATTCTGCGTGACGCACCACGAAGTGTTCATTAGCAGAAGCCATTTGGTTCCTAATGTGAATCAAATTGGTGATGCCATATCAAAGTTCCAGAATTTCGCAGCCAATAATAATGTTACTGCTGAGGAGTTTCAAGAAAGTAGCAATAAGTTGGTTGCAGTAACACAAGAATTGGCTAAGAAATTGGAAGTTCCAATGCTTGATGATTATTCGGGGTTTGCTAAGAGCTATGTTAGGTGCCTTCAATTAGCAGAAGTTGGGAACTTGATGAAAGGCGTGATTGATTTCAGCATACGGAATAAGATTGGACCTATCGAGAGCTTGGAAAAATTTCCCAAGAAACCTAGAATTGGTGATCATGGTGAAGATCAATTGCAGCAACAACAGCAGCATCAAAACGGGAATCATGATTTGAATAATGGTGGTAGGAACAATGGACACACACCTGGTATTCAAATTGGTTCTTCTAGGAATGGTACCTTAGCCACGTCAAGCACTGTTCAGATTCATAATTCAGTTGATTCTAGGGTTCAAAATTCAGTGAATGGTGAAGAAAATGCTCAGATTCAGCCCCCTAATTCCCTCCCATAA 1209 0.4078 MKPTKEVASTAANLNMLNHQQLFLSGMPQQQQQPPVPQIPVQFHQQRNILPIYQSGVCAKKMQQFVHCQQRRTADNNIIFWKRFVAELFAPNGKKSFCFSLYPRPKTRANLSLGSMKKCDICKKNPVNGYEACFDVLPRLLKVKYESGLLEERLFTDIPSEFRDPSGYIVLVCKKARRESLFDKFRVVHKGSIRIVFSPYIKICSWEFCVTHHEVFISRSHLVPNVNQIGDAISKFQNFAANNNVTAEEFQESSNKLVAVTQELAKKLEVPMLDDYSGFAKSYVRCLQLAEVGNLMKGVIDFSIRNKIGPIESLEKFPKKPRIGDHGEDQLQQQQQHQNGNHDLNNGGRNNGHTPGIQIGSSRNGTLATSSTVQIHNSVDSRVQNSVNGEENAQIQPPNSLP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01540 402 Pfam LIM-domain binding protein 63 315 IPR029005 -
Aip07g01540 402 PANTHER TRANSCRIPTIONAL COREPRESSOR SEUSS-LIKE ISOFORM X1 10 398 - -
Aip07g01540 402 PANTHER LIM DOMAIN-BINDING PROTEIN 10 398 IPR029005 -
Aip07g01540 402 MobiDBLite consensus disorder prediction 317 402 - -
Aip07g01540 402 MobiDBLite consensus disorder prediction 328 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01540 Aip-Chr7 28185006 28186214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01540 51 320 C2H2 Transcription Factor Family AT1G43850 48.162 4.05e-81 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01540 - - adu:107458399 731.865