Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01539 ATGAGTTATGGTTTCTTGGGTGTGGAAAGACTGATCATTATAGGAAGCATTGGCATACACATTGTCTGTGATCTGCTACGAGAAGAGAAAAAGTGGGAATCCAATGGGAAACCGCCGTTGAGTTTGCTGAAAGATGTCGGAGAACTATTTGTTGTTGGATCGGAGGCTGACGAATGTGAGACACTAAGGCTTGAGTCGGGGCAATCAGAAGCAGTGGATATGACAATGTTGGATACTGAGAAAAGTCGTAGGGTAGCAGATGATGCAAAAGATCAAGGATCTAGTCTGGCGAATGTGAGGTCAATTGAAGAACCAAATAGTTCCAATCGTTGCGAGGCAGGGGTAACAGCAGAAGATTTGGCTATTGCTGAGTTCGATTCAGTTGAGGAGGCATATGCAAGGTATGTGGAACATGCACGGGTTACCGAGTTTGCGGTTCGAAAGGGAGATTCGGGAAGAGATAATGAAGGTAATGTTGTGAGAAAATTTTTCTTCTGCAATAGAGAAGGATTGTGGGGTAAGAAACATTACGAGAGGATTGATAGACAGCGGGCACACAAACCAATTACAAGAACCAATTGTAATGCTAGGATTGTGGTTCATCTAGACAAGGGTTGTGGAAAGTGGAAGATGAAATCTTTCGTTGCGGATCATAACCATGAACTAGCCCCAGCAGACCACACAAATATAATGGCACCGCATCGGCACATGTCGGAAGGCGACAAGGCCCATGTTCATAGCTTGCACGAAGCAGGTTTCCAGACAACCCAAATCATGAGATTCTTTGCCTATCTCGCAGGTGGTTATCACAATTTACATTTTACAAAGAAGGATCTATATAACTATATCGATGATGTTCGATGTTCCCGCATAGTGGAGGGTGATGCTGTTGCGGCCATTAGCTATCTTAAAGGGAAGACCGAACTTGATCCCCTAGCTGTGGTACAATACTCGTACTGTGCTGAAAACCATTTGGGTAATCTATTTTGGTGTGATGGTCAAATGCAGCATGACTATGATTGTTTTGGTGATGTCTTGGCCTTTGACTCAACCTATAGAAAGAATTTATACAATAGGCCTTTGGAGCCGATGGTTGTGGTTACCAATGGAGACGAATCAATGAAGGAGGCTATCCGGAGCGAGTTTCCTAATGCAACACACAGACTATGTAGTTGGCATCTTGCTCGGAATGCTGTCTCTAATATTAAGGATGCTAATTTCTGTAGTGCATTCAAGACTGAGATTGGAAAAACATACGAGAAGAGGGCGCATTGGGCGAATGCCTATCTGTGTGATAAGTTTTGTGCTGGAGTTAGAACAACATCGAGATGTGAGGAAATCAATTCATCCCTCAAGAAGTTTATTAGATCTGGAAATTGTCTACTTGAGCTCGTGGAGAACCTAGATCGTGTGGTGAAGGATTATTGGAATAATCAGTTCATGGCCGACTTCAAATGCTTGTATTCGGAACCGGTGATGACAACAGGGTTGGAAAGTATTGAGAAGACTGTAAGCAAGGTGTATACGCGAGAAATATTCTTTGAGGTTAAGAAACAAATAGAGTCAGTTGCTGCGTTGCTCGTGCTTCATCATGAGACTTATGGTACCATTCAAAAGTTCATGTTAAGGAAGTTCCGAAGGCCCCGTAGAGTTTATACTGTTTTATACGATAGCAGTTTCGAAAATTATGAGTGCTCGTACAAGTTGTAG 1710 0.4287 MSYGFLGVERLIIIGSIGIHIVCDLLREEKKWESNGKPPLSLLKDVGELFVVGSEADECETLRLESGQSEAVDMTMLDTEKSRRVADDAKDQGSSLANVRSIEEPNSSNRCEAGVTAEDLAIAEFDSVEEAYARYVEHARVTEFAVRKGDSGRDNEGNVVRKFFFCNREGLWGKKHYERIDRQRAHKPITRTNCNARIVVHLDKGCGKWKMKSFVADHNHELAPADHTNIMAPHRHMSEGDKAHVHSLHEAGFQTTQIMRFFAYLAGGYHNLHFTKKDLYNYIDDVRCSRIVEGDAVAAISYLKGKTELDPLAVVQYSYCAENHLGNLFWCDGQMQHDYDCFGDVLAFDSTYRKNLYNRPLEPMVVVTNGDESMKEAIRSEFPNATHRLCSWHLARNAVSNIKDANFCSAFKTEIGKTYEKRAHWANAYLCDKFCAGVRTTSRCEEINSSLKKFIRSGNCLLELVENLDRVVKDYWNNQFMADFKCLYSEPVMTTGLESIEKTVSKVYTREIFFEVKKQIESVAALLVLHHETYGTIQKFMLRKFRRPRRVYTVLYDSSFENYECSYKL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01539 569 Pfam MULE transposase domain 361 397 IPR018289 -
Aip07g01539 569 MobiDBLite consensus disorder prediction 81 107 - -
Aip07g01539 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 362 412 IPR031052 GO:0006355
Aip07g01539 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 120 364 IPR031052 GO:0006355
Aip07g01539 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 417 534 IPR031052 GO:0006355
Aip07g01539 569 Pfam FAR1 DNA-binding domain 135 223 IPR004330 -
Aip07g01539 569 PANTHER OS02G0262500 PROTEIN 362 412 - -
Aip07g01539 569 PANTHER OS02G0262500 PROTEIN 417 534 - -
Aip07g01539 569 PANTHER OS02G0262500 PROTEIN 120 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01539 Aip-Chr7 28163976 28167236 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01539 FAR1 1.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01539 - - ahf:112770305 875.159