Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01531 ATGAAGTGGGAAATGGAAATATTGTCTCCAACTACAACACCTTATAATCCAAATTCCAACCTCAGCAATACCAACAACACCTTCAATTGGCTTCTTGGAGATGGAAGGAGCACAAGATGGACACCGGAAGAGAACAAGCTCTTCGAAAATGCGCTGGCCGTTCACGACAAGGACACGCCGGACCGGTGGCACCAGGTGGCTGCAATGATACCTGGGAAGACAGTTGGAGATGTTATCAAGCAATACAAGGAATTAGAAGTTGATGTGTGTAACATTGAGGCTGGTTTGATCCCGGTTCCGGGGTATAGTACTACTTCACCATTTACCTTAGAATGGGTGAATTCTCAAGGGTATGATGATGGATTTAAAGGATTAAGTGGAAAGAGACCTTCTTCTTGCTCAGGGAAGCCACCTGAGCAAGAAAGGAAGAAAGGAGTGCCATGGACTGAAGAAGAACATAAATTGTTCTTGCTTGGTTTGAAGAAGTATGGGAAAGGTGACTGGAGAAACATTTCGCGAAATTTTGTGATAACAAGAACACCAACACAGGTTGCAAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCCGGAGGCAAAGACAAAAGGAGAGCAAGCATCCATGACATAACAACAGTTAATGTCACCGAAACCGGAACATCTTCTTCAGAAGACACCAAAAGTTCTATGATGCTCTCACAGCAGCAGCAGCAACAAAATTCTAGTTCTGCTGGAACTATACCAAGAACTCATCATTTTCAGTGGAATAATCAACAACCAAATAATGCAGCAGGAGGAGTAGCTATGGAAAAAGTTTTCAATTCTGCTTATGGTGTTAACTCATTTGGGGTTACAATAATGGAAGGGCAAAATCTGAACAAGAGTGTTGAATCTTCTTCATCTTCTTCTTACTTAGGACCTCAGACACAGAACCTGGTTTTCCAAATGCAACAACAATCCTCACAGCAACAACAACAACAACACTATTCCCATGCATAA 999 0.4234 MKWEMEILSPTTTPYNPNSNLSNTNNTFNWLLGDGRSTRWTPEENKLFENALAVHDKDTPDRWHQVAAMIPGKTVGDVIKQYKELEVDVCNIEAGLIPVPGYSTTSPFTLEWVNSQGYDDGFKGLSGKRPSSCSGKPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNVTETGTSSSEDTKSSMMLSQQQQQQNSSSAGTIPRTHHFQWNNQQPNNAAGGVAMEKVFNSAYGVNSFGVTIMEGQNLNKSVESSSSSSYLGPQTQNLVFQMQQQSSQQQQQQHYSHA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01531 332 SUPERFAMILY Homeodomain-like 141 195 IPR009057 -
Aip07g01531 332 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 143 195 IPR006447 GO:0003677
Aip07g01531 332 ProSiteProfiles SANT domain profile. 148 196 IPR017884 -
Aip07g01531 332 SMART sant 144 194 IPR001005 -
Aip07g01531 332 SMART sant 36 88 IPR001005 -
Aip07g01531 332 Gene3D - 34 99 - -
Aip07g01531 332 MobiDBLite consensus disorder prediction 217 247 - -
Aip07g01531 332 Gene3D - 146 196 - -
Aip07g01531 332 ProSiteProfiles Myb-like domain profile. 140 192 IPR001005 -
Aip07g01531 332 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 298 - -
Aip07g01531 332 ProSiteProfiles SANT domain profile. 35 90 IPR017884 -
Aip07g01531 332 MobiDBLite consensus disorder prediction 296 332 - -
Aip07g01531 332 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 298 IPR043363 -
Aip07g01531 332 CDD SANT 39 85 IPR001005 -
Aip07g01531 332 SUPERFAMILY Homeodomain-like 38 92 IPR009057 -
Aip07g01531 332 CDD SANT 147 192 IPR001005 -
Aip07g01531 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 196 IPR017930 -
Aip07g01531 332 MobiDBLite consensus disorder prediction 124 147 - -
Aip07g01531 332 Pfam Myb-like DNA-binding domain 147 192 IPR001005 -
Aip07g01531 332 Pfam Myb-like DNA-binding domain 39 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01531 Aip-Chr7 27833195 27834764 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip07g01531 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01531 - - gmx:778034 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01531 07 27833195 27834764 Aip07g01531 07 27833195 27834764 ECH
Aip07g01531 07 27833195 27834764 Aip07g00912 07 10944168 10946212 ECH
Aip07g01531 07 27833195 27834764 Aip01g00430 01 5514319 5516973 ECH
Aip02g02208 02 93097627 93100764 Aip07g01531 07 27833195 27834764 ECH