Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01508 ATGGATTCGAAGTTGCAGTTCACCGTTGGGGACGATGATTCGGGGGGGCTTAGTGAGGAAGAGTATTTCCGTATCACTTCTTCGAGTGGGGATGACGAGGGTGACCCCTACGAGAATGAGTCAGACACGGCTGAAACGCGGGAAGAAATCCAAGTGAACGGGCTCGGCCCAGGTCAGGAGACATGTTTGGGTGATGCTCCCGGTTTTAGGTCCACAGAGGATTTTCTGGACAAAGTGTTTAGTACCGAGGATGAGGCTTATGCGGCATACAAACAGTTTGCCAGGCTCAGGGGGTTTGGTGTAAGGAAGGGTGACGTCGCTCGAATGGACGGTGTTTTGGTTAGACGAGATTTTTTTTGTCACCGTCAAGGTACAAGGCATGAGAAACACTACGATCGTCCAGAAAGAGTAAGGGAGGAGAAGCCGGAGAGTCGTACGGGTTGTTCAGCGAAGCTGAAAATTTACTATGATTTGCAAGATCAGTTGTGGAAGGTCCGGAGGATAGACGACAACCATAACCACCCTCTTGCTACCACCATGTTTACTCATCTTCTTCCTAGTCATCGGAATATGATCGGGGGTTACGGGATGCTTCGGTTTACGAAGAGGGACCTCTATAATTACGTTCACAGCCAAAGGATAGCACAACTTAACGACGGAGACGCGGCAGCAGCAATAAGTTACTTGGAAGGCAAGGCCAACGCTGACATGATGACTGTCGCCAGATATACGAAAACAACAGGGGATCAACTTGGCAGCCTTTTCTGGGCGGATGGGCAGATGATGGCGGATTACCAGCTTTTCGGTGACGTCCTTGCATTTGATGCAACATACAGGTCAAACAAGTACAAGAAGCCTCTAGTCGTGTTCTCTGGATCAAATCATCACAAGCAGACGGCAATCTTCGGATTCGCGTTACTGCAGGACGAGGAAGTCCGTACATATAGATGGGTGTTGCTAAATATGCTTGATGTCATGGAAAGCAAGAAGCCTTCCGTTGTGGTCACGGACGGGGATAAAGCCATGCGGGCAGCGATCGCGGACGTCTTCAAAAAGGCTGTTTATGCGAACTTCGATGTTGCCGAGTTTGAGGAGTACTGGAGGACGGCCGTGGAAAGCTTAGGATTAATGGAGAACAGCTGGGTCAAAAGCACGTACGAATTAAGACAGAGCTGGGCAACGGCATATCTACGGGGCACGTTTTGCGCCGGCTACAGGACAACTTCCAGGTGCGAGGGCATAAATGCATTCGTGAAGGGGTTCCTGAAGTCCACAAATAGCCTTCTTGAATTGGTTCAGAGCCTGGATAGGGTGGTGAAAGACTACCGCAACAACGAGCTCACGGCTCAATTTTATTCTTCGTACTACACGCCTGTACTGACTACAGGCCTTGATAAGATCAAGCTGTTTGCTGCGAAGTTATACACCAGGGCAGTCTTCAAGGAGGTAAGGAAACAGATAAAGGGGGTAGGGAGTTTATTATTTCTGGGGAAAGACAGCATTAGCACGACGTCCGTCTACAAGTTCTCAAGCGTCGGGAACCGCAGCAGGGTTCGCAAGGTCCTTTACGATCCGAGCGAACCAAAGATTGAATGTGACTGCATGATGTGGAACAGTGAAGGCATTCCTTGCTGCCATATATTTTGCGTGATGAAGTATGAGGGTTTAGGCGAAATCCCACCTGGTTTGATACTCAGGCATTGGTGTAAAGATGCCAAGGAATGGACAGCATCCTCAACATGTGATTCATTGGGACACACCAGTCGTTTACTGCGGTACGGCGCTCTGTGCAGTTCCATGAGTGTCGTCGCGAAGCTAGCTTCTGATGATGCAGCTGACTTCTTCTTAGCGAGGGATGCACTTACCTCTTTGGCACGGCGGCTACAGCTACGAAGGGGCAATACAGTTCCCCAAGATGAGACGGTGCGGGAAGAAGACGTGCTGAGGGATCCGGCTATCACCCGGACAAAGGGGGCACCCAAACGTGGTAGGGAGATGGGGTCCGCGACAAATGCAGTTCCTGGGGGGAAGAGGCGTTGCTGCACTTCTTGTGGGCTTCCCGGTCACACGAAGAGGACCTGCATGTCCCAACGAGAGACGAGCCAAGCTGGGTACCCAGAAGGGACATCAGCCACGGTCGGGGATCCATCGTCAGGCGAGCCAAGTGGAAATCGTTCGGGGCGTAGTTGCTCAGAGGCTGCACACGGCGTCTCCCAACCTGCTGATGCCGGCGGAGCGGCTCCATACATACCGACACCCCACGAACCAAATGCAACCAATTCGACTCTACCCCGGCTGAACCAAGGTGTAGGCGGTGGGAACTTCTTCCTGGGGGGGCAGCACATAGAGCAGTTCTTTGCCGCTCCCAGTTGCTCAACCAACCACGGGTTAGTTCCTACTCAAGCAGGTGCGATAGTTTCCTCACCTGAACGAGCCCCCGGAATCACTCCTACGCAGTTTAGCACACCAGGTTCCGATGCCTTCCAACAGTGGATTCTAGAGGCTGAGATTATGACTGTTGAATCTTACTTCAGAATGCAATGGGGAAACAGTGGTCCGGCAACAGGTGCTCAGGGAACTTTGTATAGGCTAAGCAGCCCCGCTTTGCGGAGAAAATGGGACTCCGGAAGGCAACAACCGCCTAGCTTTCAACAAGTTTTCATCATCTGA 2670 0.5161 MDSKLQFTVGDDDSGGLSEEEYFRITSSSGDDEGDPYENESDTAETREEIQVNGLGPGQETCLGDAPGFRSTEDFLDKVFSTEDEAYAAYKQFARLRGFGVRKGDVARMDGVLVRRDFFCHRQGTRHEKHYDRPERVREEKPESRTGCSAKLKIYYDLQDQLWKVRRIDDNHNHPLATTMFTHLLPSHRNMIGGYGMLRFTKRDLYNYVHSQRIAQLNDGDAAAAISYLEGKANADMMTVARYTKTTGDQLGSLFWADGQMMADYQLFGDVLAFDATYRSNKYKKPLVVFSGSNHHKQTAIFGFALLQDEEVRTYRWVLLNMLDVMESKKPSVVVTDGDKAMRAAIADVFKKAVYANFDVAEFEEYWRTAVESLGLMENSWVKSTYELRQSWATAYLRGTFCAGYRTTSRCEGINAFVKGFLKSTNSLLELVQSLDRVVKDYRNNELTAQFYSSYYTPVLTTGLDKIKLFAAKLYTRAVFKEVRKQIKGVGSLLFLGKDSISTTSVYKFSSVGNRSRVRKVLYDPSEPKIECDCMMWNSEGIPCCHIFCVMKYEGLGEIPPGLILRHWCKDAKEWTASSTCDSLGHTSRLLRYGALCSSMSVVAKLASDDAADFFLARDALTSLARRLQLRRGNTVPQDETVREEDVLRDPAITRTKGAPKRGREMGSATNAVPGGKRRCCTSCGLPGHTKRTCMSQRETSQAGYPEGTSATVGDPSSGEPSGNRSGRSCSEAAHGVSQPADAGGAAPYIPTPHEPNATNSTLPRLNQGVGGGNFFLGGQHIEQFFAAPSCSTNHGLVPTQAGAIVSSPERAPGITPTQFSTPGSDAFQQWILEAEIMTVESYFRMQWGNSGPATGAQGTLYRLSSPALRRKWDSGRQQPPSFQQVFII 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01508 889 MobiDBLite consensus disorder prediction 691 766 - -
Aip07g01508 889 MobiDBLite consensus disorder prediction 651 677 - -
Aip07g01508 889 MobiDBLite consensus disorder prediction 1 47 - -
Aip07g01508 889 Pfam FAR1 DNA-binding domain 90 177 IPR004330 -
Aip07g01508 889 PANTHER OS01G0607050 PROTEIN 73 606 - -
Aip07g01508 889 MobiDBLite consensus disorder prediction 691 733 - -
Aip07g01508 889 SMART 26again6 530 557 IPR006564 GO:0008270
Aip07g01508 889 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 606 IPR031052 GO:0006355
Aip07g01508 889 Pfam MULE transposase domain 271 352 IPR018289 -
Aip07g01508 889 ProSiteProfiles Zinc finger CCHC-type profile. 681 694 IPR001878 GO:0003676|GO:0008270
Aip07g01508 889 ProSiteProfiles Zinc finger SWIM-type profile. 519 555 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01508 Aip-Chr7 26969138 26972383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01508 FAR1 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01508 - - aip:107633461 1050.43