Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01480 ATGTCCATAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGATAGAGGATGAGGCCTGCCAGTTTTATAATGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATAATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATCTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTTCTGTCCAATCGTCGTCTCACTGTCACTGATAAAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCGTTCCAGAAGGGTGGATATTGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCGTCAGTCAAAGGTTAAAAACGGGGATGCTAATGCGGCAATAAACTATTTGATTGGCAAGTTAAACAACGATCCGCCGTTCTTTGGAAAGTATACTTTCACTAGTGACGAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATCGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAATCCTAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCACGATTTTAAGGGTCTTATATACGACAACAACGACCACAGAGACTTTGATCAAAGATGGGCAGCTATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTTCGATGTGGTCTCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGCGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAAAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATCGCTGACTTTAAGTCTCAGTTCTCAGAGCCAGTGATGATTACCTCATTGGAGGTATATGAAAGATTTGCATCATGTTATTTCACTCGAAACATTTTTAAGGAAATTCGTAATGAGATTCAAAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGACAAGGTTGAGTTCAGTGTGACTGCTCTCGGAGATTCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGATGTTTGAATCACGTGGTATTCCCTGTAGTCATGTCTTCTATGCAATGAAGTTTGAAAACATACTTGAGTTTCCAGATTCGTTGATCTACAAAAGGTGGACAAAGAATGAAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGACGTCGAAAGGGTCTTAAAGTTTCGAGTTGGTGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTATGAACTTGTCAATTTAATTCTCCGTCTGCAGTCACGCAAACAAGTGAAGGAGTCACAGCAGGACAAGGGACATTCATTCACAAACTATGAATGCACTGTTGATGATGTCATGGATGAGAAATGTGACACACCACATGTGCAGATCGATGTCCGAGATCCATTTCCATCGTCAATGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCACGTCGATGCATAGGACACTTTGA 2220 0.4239 MSINEDDVKNDSDNDLGDDFDYQPNAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRIEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDNRSREARSLTRTKCPARLRVKLDYGCGRWKVSSFVESHNHDLTPPQFAHLVLSNRRLTVTDKVQVENLHNFGVKTCHIMGYIAFQKGGYCHAGFTRKDLYNHIDRYRQSKVKNGDANAAINYLIGKLNNDPPFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKNPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLHDFKGLIYDNNDHRDFDQRWAAILDKHNLVGSTWMEKTYETRSMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQFSEPVMITSLEVYERFASCYFTRNIFKEIRNEIQRAGALNIKVLSTTLDKVEFSVTALGDSAKDRRVEVDRGKNLFSCSCKMFESRGIPCSHVFYAMKFENILEFPDSLIYKRWTKNEKNEFISTEMPVNDDVERVLKFRVGALASNCNKLCDIACKDLADFDEVQYELVNLILRLQSRKQVKESQQDKGHSFTNYECTVDDVMDEKCDTPHVQIDVRDPFPSSMPCGNKQGSYMALFTSMHRTL 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01480 739 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 673 IPR031052 GO:0006355
Aip07g01480 739 MobiDBLite consensus disorder prediction 11 31 - -
Aip07g01480 739 SMART 26again6 570 597 IPR006564 GO:0008270
Aip07g01480 739 MobiDBLite consensus disorder prediction 1 38 - -
Aip07g01480 739 Pfam MULE transposase domain 282 376 IPR018289 -
Aip07g01480 739 Pfam SWIM zinc finger 571 587 IPR007527 GO:0008270
Aip07g01480 739 ProSiteProfiles Zinc finger SWIM-type profile. 559 595 IPR007527 GO:0008270
Aip07g01480 739 PANTHER OS02G0262500 PROTEIN 56 673 - -
Aip07g01480 739 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01480 Aip-Chr7 25702492 25704711 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01480 MULE 3.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01480 - - ahf:112755379 1298.49