Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01468 ATGTCTTGCTCCGTCGCAGTTTCCAATTCTCCAGTGTTCTCTCCTCCGTCGTCGCTATTCTACTCCAAGCCTTCAATCATTACTTCAATTTCTGCTGCTGCGGCTTCTTCTACGGCGTCGTCTTGCTCTTCTCCCGCTTCTTCTTCTTCTCCTTCTCCTTCTTCTCCTTCTTCGTCGCCGTTGCGTCTTCGTCTTCCCAAGCCGCCTATTCCCGCTTCGCTTTCCGGTGTTGTTGCCGTTTCAGCTTCCGCTACGTCACCAAACGGCACCGTTTTGAAGAGGAAGAGGCCTGCTAGGCTTGATATACCTGTTAGCTCCTTGGCCTTTGGGATTCCGCCCACACCCTCTGTTGCGCCGCCGCGTGATGTTGTGGAGGAGGAGCGTGATGCCTTCTCTGTTTATTGCAAGAGAGGGAGGAGGGAGTACATGGAAGATCGCTACTCCGCAGCTGATAACCTACGCGGCCAACAAAAACTGGCATTTTTTGGAATTTTCGATGGGCACGGTGGTGCAAAAGCTGCCGAATTTGTGGCAAATAACTTAGAAAAGAATGTGTTAGATGAAGTGATTCTTAGCGAAGAAGAAGATAGCATTGAGGAGGCTGTGAAGCGCGGTTATCTCAAGACTGATTCTGCTTTCTTGAAAAGTGATCTCCATGGCGGATCTTGCTGTGTCACCGCTTTGATTCGCAATGGTAACCTTGCTGTGTCCAATGCCGGCGATTGCCGCGCCGTTATAAGCAGAGGAGGGGTTGCTGAGGCCCTCACTTCCGATCACCGCCCTTCCCGGGAAGATGAAAGGGAAAGAATTGAGACTCTGGTAAGAAGCATTCCATGA 837 0.5102 MSCSVAVSNSPVFSPPSSLFYSKPSIITSISAAAASSTASSCSSPASSSSPSPSSPSSSPLRLRLPKPPIPASLSGVVAVSASATSPNGTVLKRKRPARLDIPVSSLAFGIPPTPSVAPPRDVVEEERDAFSVYCKRGRREYMEDRYSAADNLRGQQKLAFFGIFDGHGGAKAAEFVANNLEKNVLDEVILSEEEDSIEEAVKRGYLKTDSAFLKSDLHGGSCCVTALIRNGNLAVSNAGDCRAVISRGGVAEALTSDHRPSREDERERIETLVRSIP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01468 278 MobiDBLite consensus disorder prediction 257 278 - -
Aip07g01468 278 PANTHER PROTEIN PHOSPHATASE 2C 3 273 IPR015655 GO:0004722|GO:0006470
Aip07g01468 278 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 273 - -
Aip07g01468 278 Pfam Protein phosphatase 2C 132 273 IPR001932 -
Aip07g01468 278 SUPERFAMILY PP2C-like 130 272 IPR036457 -
Aip07g01468 278 Gene3D - 123 276 IPR036457 -
Aip07g01468 278 MobiDBLite consensus disorder prediction 256 278 - -
Aip07g01468 278 ProSiteProfiles PPM-type phosphatase domain profile. 130 278 IPR001932 -
Aip07g01468 278 CDD PP2Cc 131 273 IPR001932 -
Aip07g01468 278 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Aip07g01468 278 MobiDBLite consensus disorder prediction 39 61 - -
Aip07g01468 278 MobiDBLite consensus disorder prediction 39 66 - -
Aip07g01468 278 SMART PP2C_4 120 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01468 Aip-Chr7 25419032 25420980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01468 1 272 PP2C-type Phosphatase Gene Family AT2G30020 56.537 1.20e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01468 K17506 - pvu:PHAVU_008G259800g 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01468 07 25419032 25420980 Aip07g01468 07 25419032 25420980 ECH