Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01460 ATGGCTTCTTCAACTTCAACGTGGGTTAGAGGCAAGTGCGTTGGAAGGGGCGCCTTTGGCACCGTTAACGTGGCGGTTACAAAATCAGACGGTTACGTTTTTGCAGTTAAGTCCGTCGATCTTATAACGGCTCCGACGGCTCAGATTGAAGCTTTGGAGAACGAGATTAGGATCTTGAGGCTCCTACCTCCCAGTCCTCACGTGATCACTTTCCTCGGCGATGATGTCACGTGCGAGAGGACCAACGGGGCTTCCACGTTCAGAAACCTGCACTTGGAGTACATGCCACGTGGCACCGTCGCTGATTTGGACCCTGCTGACGTGGACGAACGGTTGGTTCGCCGTTACGCTTCCTGCTTGGTTCACGCGCTGCGCCACCTCCACGCTCTTGGCGTTGTTCACTGCGACGTTAAGGGAAGGAACGTGCTAGTTTCCGACGACGGCGGAGCGGTGAAGCTCGCGGATTTTGGATCCGCTGCGGAATATTCCGGCGAGAGTTGCGTTGGTTCGAGGGGGAGTCCGATGTGGATGGCGCCGGAGGTTGTTCGCCGGGAGTACCAGGGGCCGGAGTCTGACGTGTGGTCGTTGGGTTGCACGGTGATTGAGATGGTCACCGGAAAGCCACCGTGGGAGGATCGCGGCGCTGACACGCTGAGTCGGATCGGGTATTCTAGCGAGTTGCCTGAGTTTCCGACTCGGTTATCGGAACTCGGTCGGGACTTCCTAGAGAAGTGTCTGAGAAGGGAGAAGAGTGAGAGGTGGAGCTGCGATCAGCTTCTGCAGCATCCATTTTTGGTCGGTGAGGGTTCCATTAAGGTTTTGGAATCGTCGCCTCGGTGCGTTTTGGACTGGGTGGACTCGGGGTTCGACTCGGACGAAGAAGAAGGAGAGATGAACTGGGAAGGTGAGTGTGTGAGTTCGGCGAAGGGTAGAATTTGTAAATTGGCTACGGGGATAGGGGCAAACTGGGAAACACAGGGATGGATAGTGGTGAGAGCATTGGCATCTGAGTCTGACGAAGAAGCAACGATAATAACAGAAGCAACAGGAAACGGAGAAGAAGGGGTAGTTTCGGAATTCGGAAATGATGTGGCGAGGGTAGAATCGGGAATTGAGGTTGGGGCATGTGGGGAATATTCGGATTTTTGTGGAAGGACAGGAGAGAAAGTTGGAAGGGTAAAATGGGAAAGGCGAAAGAACAAAAGGTTGGTGTGGCGGCGGTGGAAGCTCCACCGGCAGGGTGGTGGTTGTGGCAATAAGTGGGAAAATGAGTTGGATAAGAATGGGATTAAAGGAATATTCACAATTTACAGCTTGCATTCGGGAATGCCTCAAATCATCAGGATTCTCATGATATAA 1359 0.5327 MASSTSTWVRGKCVGRGAFGTVNVAVTKSDGYVFAVKSVDLITAPTAQIEALENEIRILRLLPPSPHVITFLGDDVTCERTNGASTFRNLHLEYMPRGTVADLDPADVDERLVRRYASCLVHALRHLHALGVVHCDVKGRNVLVSDDGGAVKLADFGSAAEYSGESCVGSRGSPMWMAPEVVRREYQGPESDVWSLGCTVIEMVTGKPPWEDRGADTLSRIGYSSELPEFPTRLSELGRDFLEKCLRREKSERWSCDQLLQHPFLVGEGSIKVLESSPRCVLDWVDSGFDSDEEEGEMNWEGECVSSAKGRICKLATGIGANWETQGWIVVRALASESDEEATIITEATGNGEEGVVSEFGNDVARVESGIEVGACGEYSDFCGRTGEKVGRVKWERRKNKRLVWRRWKLHRQGGGCGNKWENELDKNGIKGIFTIYSLHSGMPQIIRILMI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01460 452 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 357 - -
Aip07g01460 452 SMART serkin_6 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01460 452 CDD STKc_MAPKKK 8 265 - -
Aip07g01460 452 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01460 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 357 - -
Aip07g01460 452 Gene3D Transferase(Phosphotransferase) domain 1 3 300 - -
Aip07g01460 452 ProSiteProfiles Protein kinase domain profile. 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g01460 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Aip07g01460 452 SUPERFAMILY Protein kinase-like (PK-like) 6 278 IPR011009 -
Aip07g01460 452 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01460 Aip-Chr7 25304079 25306147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01460 1 373 MAP Kinase Kinase Kinase AT1G07150 56.316 6.19e-136 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip07g01460 Pkinase 9.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01460 - - mtr:MTR_5g071560 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01460 07 25304079 25306147 Aip07g01460 07 25304079 25306147 ECH