Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01440 ATGGATTCGAATTCTCCAGAGGTTGTGCAAGTTAATTCAGGTTCACAAATGGATGTAGATTCACAAGAACAAGAAGAAGACATGCAAGTGGATTCAGATGAAGCCGTGCAACAAGCCAATTCAGAATCGCAAGAAGCGAAAACAGATATTGCTCTGATCATGCCAACACTCACTGCTTATATGAACGTGATAAGGACTAATAATTCCACGGTGATTGATGCGATTCACAACTACTTGGGACAATACCTTCAATCCGAAGAAATCGATGACTTGGACTTCATGGAACATATCTCAATCGATGCCTCCAACTTGGTGATCAACGCGATTCATCCAGATATGATTGATAACCTCCACAAAGAAGTTAAGATGATGCTCGAAGCAGGCTTTGACAGAGAATGTTGCAACGAGTACAGCAAATTTCGCACTAAGTGCTTAGGAAGCTACCTGTCATATATGAAGACTCTGCAGCCACAGCTTGAATTTGAGGAAAATGCTAAGAAGGGGACAAAGTTTTTTAATCATGAGATTAGGGAATGGACTAAAGTTTCAAATGTAATTGTGAGGGTTTTGCTTCCAAGTGAAAGAACACTCTGCCAGCGCGCTTTCTTGCGTTACACGGAAGCTAAGAATCTTGCTTTAATGGAGGTTTGTAGGCCGTTGCTGATTAGAATACTAGATTCCGCGGTTAAACATGCAGTTGAACTTGCTCGCTCCAATAAAATTGAATATTTTTCCAGGATTTCCAGAGTGTTCAAAGCATTTCATGACTTGATTCCGGAGATTGAGTCGCTGTTTCCCAGCCCTGAGCCACTTGGCGATTCGATAAGAAATGAAGTCATCAACACTAGAAAGAGGTTGGGGAAAGCAACTATGGACATTCTTGAGAGGCTAGAGGATTGGATTTACAAGGAGAATGAGATGGCGAGTTTTTATGGAGGGCTTTATCCGATAATCTCTTGGGATGTGATGAACTGCCTGGGGGAAATCTGCGAAGCTTGGACTGTAATCGGCCTTGAGAAAGTTCTAGAAGAGATTCCAATGGTTTCTGATGGAGAAGGAACTGCTTCTTGTTCTTCATTCTCTGTTCAGTTTGATAGGATAATAGAGATGTTAAATAGCCATGTGGAAATCGAATCTAAGAAATATACTGACCCTGCTGAGGGCTATATTTTCATGATGAATAGTCAGAGGTATATACAACAGAAGATAATTGAGTGTCAATCAAAAATGAGCACGATTTTGCTGATGATGAATGGCGCGATCGATGAGAATAATGCCAAGGCGAGACAGAATCTCGAAGATTATCGAGGAAGCTCGTGGGATGAGGTTATTGGGCTTTTGAAGCAGGGCGACGGAGACGAGCCAAATGAGGTGGAATCTATGAAAGAGAATCTCAAATTGTTCAATGTTCAGTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTTCTTGATGACGAGCTAAGAAAGGAAATAAGAGAGACCATAGAGGAAATTTTGTTGCCAAGTTATGGAACCTTCATTGGTAAGTTTCAGAAAGTTCTTGGTTCTGATGCTGATAGGTACATTGAGTATTCAATGTATGACATTGATGCTCTACTCAATGATTTGTTTCGCGGAGGCAGTTGA 1632 0.4105 MDSNSPEVVQVNSGSQMDVDSQEQEEDMQVDSDEAVQQANSESQEAKTDIALIMPTLTAYMNVIRTNNSTVIDAIHNYLGQYLQSEEIDDLDFMEHISIDASNLVINAIHPDMIDNLHKEVKMMLEAGFDRECCNEYSKFRTKCLGSYLSYMKTLQPQLEFEENAKKGTKFFNHEIREWTKVSNVIVRVLLPSERTLCQRAFLRYTEAKNLALMEVCRPLLIRILDSAVKHAVELARSNKIEYFSRISRVFKAFHDLIPEIESLFPSPEPLGDSIRNEVINTRKRLGKATMDILERLEDWIYKENEMASFYGGLYPIISWDVMNCLGEICEAWTVIGLEKVLEEIPMVSDGEGTASCSSFSVQFDRIIEMLNSHVEIESKKYTDPAEGYIFMMNSQRYIQQKIIECQSKMSTILLMMNGAIDENNAKARQNLEDYRGSSWDEVIGLLKQGDGDEPNEVESMKENLKLFNVQFKEICRVQSTWFVLDDELRKEIRETIEEILLPSYGTFIGKFQKVLGSDADRYIEYSMYDIDALLNDLFRGGS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01440 543 Gene3D Exocyst complex component Exo70 23 543 - -
Aip07g01440 543 MobiDBLite consensus disorder prediction 1 19 - -
Aip07g01440 543 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 32 540 - -
Aip07g01440 543 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 540 IPR004140 GO:0000145|GO:0006887
Aip07g01440 543 SUPERFAMILY Cullin repeat-like 67 539 IPR016159 -
Aip07g01440 543 Pfam Exo70 exocyst complex subunit 178 537 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip07g01440 543 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01440 Aip-Chr7 24736095 24738166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01440 103 541 EXO70 exocyst subunit family AT5G58430 38.288 8.73e-86 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01440 K07195 - adu:107458298 1031.55