Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01426 ATGGCGAGTGTTGTGACATCATTACATTGGGGCCTGCCTCTAACTGTAAACCCTCTTCGTATTCACATAACAAACATGGAAGCAGCTCTGTCTACTAGCACAACAATGTCCCCTTCTACCACCAATGGTGGAACCTCATCTTTTGCCAAAACCTGTTTCCATGGGGTTAATGGCATTTCAGGAATTGGTATAGTGTCTATACCATTTGCATTAGCCTCAGGAGGTTGGTTAAGCATAGTTTTTCTGTTCATGATATCCATAGCAGCATGCTACACAGGCTTATTAATCAAAAGATGCATGGACAAAGATTCCACTATTGAATCTCTTCCAGATATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTTGTAAACATTGCAATGAATTGTGAACTTTATTTGGTCATAACAGGGTACTTGATTCTTGAAGGAGATAACTTGAACAAATTAATATCTCATTTTCATGTGGATATTGGAGGATTGAGAATTACTGGAACACAATTCTTTGTTCTACTTTCAGCACTGATTATTCTCCCAACGGTATGGTTAGAAGATCTAGGTAAACTTCTATCATATGTGTCAGCAACTGGGGCCTTAGCATCAATTATATTTCTATGTTCGTTGTTGTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGAGTACTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTTAGCTTGTATGCATTTTGTTACAGTTCTCACCCTGTCTTTCCAAGTCTCTACACTTCCATGAAGAACAAGCATCAGTTCTCTAATGTTTTGCTGGTGTGCTTCACATTGTGCACTTTAGTATATGCAGCAACAGCAGTTTTGGGATACTTAATGTTTGGATCAGAGGTTGAATCAGAAATAACTCTGAACCTTCCAAAAGAAAAGCTCAGTTCAAAAGTGGCAATATACACAACTTTGGTTAACCCCATAACCAAATATGCTCTGATGCTAAGGCCAATTGTGGATGCCGTAAAAAGCGTGCTTCCAAATCACTACAACAAAAGGCACAAGCTCACACATGTTGTTGTTAGTAGCATCCTTCTCATTTCTACTGTGGTTGTTGCACTCACTGTTCCATTTTTTGGATACCTTATGTCTCTCGTGGGTGCATTACTAAGTGTCTCGGCTTCATTCCTAGTGCCAAGTGTTTGTTACTTGAAGATTTCTGGAACATACAAGAAGTTAGGGTGTGAAATGATCATCAACTACTCTATTTTCTTTGTAGGTACTGCAATTGCTGCCTTTGGAACTTACACTTCACTCCTACAAATAATTAAGCATTTAAAGTTGTAA 1320 0.3879 MASVVTSLHWGLPLTVNPLRIHITNMEAALSTSTTMSPSTTNGGTSSFAKTCFHGVNGISGIGIVSIPFALASGGWLSIVFLFMISIAACYTGLLIKRCMDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDIGGLRITGTQFFVLLSALIILPTVWLEDLGKLLSYVSATGALASIIFLCSLLWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFTLCTLVYAATAVLGYLMFGSEVESEITLNLPKEKLSSKVAIYTTLVNPITKYALMLRPIVDAVKSVLPNHYNKRHKLTHVVVSSILLISTVVVALTVPFFGYLMSLVGALLSVSASFLVPSVCYLKISGTYKKLGCEMIINYSIFFVGTAIAAFGTYTSLLQIIKHLKL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01426 439 Pfam Transmembrane amino acid transporter protein 45 429 IPR013057 -
Aip07g01426 439 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 435 - -
Aip07g01426 439 PANTHER OS05G0424000 PROTEIN-RELATED 13 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01426 Aip-Chr7 24506089 24509414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01426 42 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.962 5.56e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01426 K15015 - gmx:100784690 508.064