Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01363 ATGCATGATGATGGATACAGTTGGAGAAAATATGAAGAAAACCCATTAAGAAGGGGAAATCAGACAAGCTGCTACAGATGCGCACATCCCAATTGCAAAGTTAAGAAGAAAGTAGAGAGAACAATTGATGGGGAAATTATTCATGTAAACTACAAAGGTACTCATGCCCATTGTCGCAAGCCTAGATTCACTATAAAGAGGAACTCATCATCTGAATCCTTTTATTCATATCTATCGTCAAAGCCTTTCCACACTGATATGATAGATCAATCATTATTGGCCTTCAATGGCAATGGACAATTGGATCATGTAACAGAACCAGAGAGCTCATCATTATCAATATGA 345 0.3739 MHDDGYSWRKYEENPLRRGNQTSCYRCAHPNCKVKKKVERTIDGEIIHVNYKGTHAHCRKPRFTIKRNSSSESFYSYLSSKPFHTDMIDQSLLAFNGNGQLDHVTEPESSSLSI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01363 114 Gene3D WRKY domain 1 61 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01363 114 Pfam WRKY DNA -binding domain 3 57 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01363 114 SUPERFAMILY WRKY DNA-binding domain 2 58 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01363 114 SMART WRKY_cls 2 59 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01363 114 ProSiteProfiles WRKY domain profile. 1 57 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01363 114 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 113 IPR044810 GO:0003700
Aip07g01363 114 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 2 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01363 Aip-Chr7 22809018 22809362 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01363 3 59 WRKY Transcription Factor Family AT3G01080 53.448 4.13e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g01363 WRKY 1.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01363 K13424 - gmx:102667674 100.908