Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01349 ATGTGTGAGAGTGAGCCGGATTCAGACGATGGCAGCATGTTAGAGTTGTTAGGCCAATGGACTGATGGTTGGAGCACCGATTCAGATGCCTTAACAAAGGATCATGGGAACTCAAGGAATACCATGGGTGAACAAATCAGTAGTCTAGACACTGTGAATGCTTCTGCATTGTTATCTGCAGAGTTTAGTGGGGTTGAAGATGCGTATGCAAGCTCTGTGGCGTATGCAAGGGGTATTGGTTTTGTGGTGCGAAAGGAAGATTCTATTAAAGACGAGCTGGAAAATATTGTGAGGAAGTTTTTCTACCGCAATCGGCAAGGGCTGCATGAAAAGAAGCACTATGAGAGTGTTAACAGAAAAAGGCCCCATAAACCGACGGCGAGAACAAATTGCAATGGAAAGCTTGTTGTGTTTCTGGACAAAAGTTGTGAGAAGTGGAAGATTACAAAAGGGCACAAAGCGCATATACATAGCATGCATGAAGCCAGGTTCCAAACAACTCAAATCATGGGCTTCTTTGCCCATATGTGTGGTGGATATCGCAATCTTAAATTCATAAGTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCCAGGATCATGGAGGGAGATGCAGCCACAACAATAAGCTACTTGAAGAGCAAGGTTGAGTTGGATCCTATGGCACCAACCACCATAGACAGACAATTATTTGGGTTTGGTTTGCTAGAGGTCGAGAAGATTCCGTCCTACAAATGGTTGCTAAGTAGCTTTCTGGAGGTAATGAGACACAAGGAGTTGAAAGTGGTTCTCACAGACGGTGATGAATCCATGCGAGAGGACATTAGAAGTGAATTTTTGAACGCGATACATAGACTATGCACCTGGCATCTTGCTCGAAATGCAGTTGTGAATATCAAGGACAAAGATTTTTGTGCTGCATTTAAGACTGCTGTGTATGGTCACTTTGATGTGGAAGAGTTTGACAATTATTGGGTGGACATGGTCATGTCATTCGGTCTTGAGGACAACGATTAG 1023 0.4321 MCESEPDSDDGSMLELLGQWTDGWSTDSDALTKDHGNSRNTMGEQISSLDTVNASALLSAEFSGVEDAYASSVAYARGIGFVVRKEDSIKDELENIVRKFFYRNRQGLHEKKHYESVNRKRPHKPTARTNCNGKLVVFLDKSCEKWKITKGHKAHIHSMHEARFQTTQIMGFFAHMCGGYRNLKFISKDLYNYMDGVRQSRIMEGDAATTISYLKSKVELDPMAPTTIDRQLFGFGLLEVEKIPSYKWLLSSFLEVMRHKELKVVLTDGDESMREDIRSEFLNAIHRLCTWHLARNAVVNIKDKDFCAAFKTAVYGHFDVEEFDNYWVDMVMSFGLEDND 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01349 340 PANTHER OS02G0262500 PROTEIN 232 331 - -
Aip07g01349 340 PANTHER OS02G0262500 PROTEIN 54 157 - -
Aip07g01349 340 Pfam MULE transposase domain 231 296 IPR018289 -
Aip07g01349 340 Pfam FAR1 DNA-binding domain 74 159 IPR004330 -
Aip07g01349 340 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 232 331 IPR031052 GO:0006355
Aip07g01349 340 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 157 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01349 Aip-Chr7 22312205 22313572 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g01349 FAR1 9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01349 - - aip:107610720 470.7