Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01345 ATGGCATCTTCTTCTGGTACCTTAGACACTACTTCTGCTTCCAATTCTTATACCAATAACTTCACTTTCTCAACACACCCATTCATGACCACTTCTTTCTCTGAACTCTTAGCTTCTTCCGCTGAAGACAAGCCTCGTGCTTCTGCTTCTGCTGTTGGTGTTCCTAAGTTCAATCCTACTGAACTTCTTGATTTCCCTGTTCTTCTTAATCCTTCTAACATTTTGCCATCTCCAACAACGGGGGCATTTGTTGCACATAACTACAATAATTGGAAGAACAACAACAACAATTCTGGTGGGAACCAACAACAAGTTATCATCAAAGAGGAAGAAGGAAAGAACCACAATTTCTCAAACTTCTCTTTCCAAACCCAGCCATCTATGTTTCAATCCTCATCAACTGCCACAACTAAAACAGTATGTAACCAATTTCAACAGCAGCAGCAGCCATGGGGATTTCAAGAATCCAACAAGAAACAGGAAAATTTCTCATCATCAAACACTGTGATGAAAACTGAGAACACTTGTTCCAACCAAAACAACAATGGGTTCCAATCAGATTACAACAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCAAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAATACTAGGAGAAACTCTTCATCTTCTTCTAATTCTGCTGCGTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGACAAATGGATTCTGTTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAGGTGGAGATGATTATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTAGTTAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGTTGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATAACAACCTATGAAGGCAAACACAACCATGATGTCCCCGCTGCCCGCGGCAGCGGAAGCCATGCCTCTGTCAACAGACCAATGCCAAACAACCACCACAACAATGCAAGCATTGCAATTAGGCCTTTACCATCAATGACACACCACAACAACAACAACACTAACAACACTACTTCCCTTCAACAAGGGCCAGAAGGACAATCACCCTTCACACTTGAAATGCTTCAGAACCCTTCAAGCTATGGATTCTCATCTTCTGGGTTTGGGAATCCAATGGGTTCTTACATGCCTCAGCAGCAACAACAACAACAGCAATCTGACAATGTGTTTTCTTCCAGAGCCAAGGAGGAACCTAGGGATGACATGTTCCTTGAATCTCTGCTATGCTGA 1674 0.4235 MASSSGTLDTTSASNSYTNNFTFSTHPFMTTSFSELLASSAEDKPRASASAVGVPKFNPTELLDFPVLLNPSNILPSPTTGAFVAHNYNNWKNNNNNSGGNQQQVIIKEEEGKNHNFSNFSFQTQPSMFQSSSTATTKTVCNQFQQQQQPWGFQESNKKQENFSSSNTVMKTENTCSNQNNNGFQSDYNSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSVATPENSSISVGDDDFEQSSQRCKSGGDDYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHASVNRPMPNNHHNNASIAIRPLPSMTHHNNNNTNNTTSLQQGPEGQSPFTLEMLQNPSSYGFSSSGFGNPMGSYMPQQQQQQQQSDNVFSSRAKEEPRDDMFLESLLC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01345 557 MobiDBLite consensus disorder prediction 451 539 - -
Aip07g01345 557 MobiDBLite consensus disorder prediction 325 353 - -
Aip07g01345 557 Gene3D WRKY domain 190 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 ProSiteProfiles WRKY domain profile. 376 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 Gene3D WRKY domain 368 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 MobiDBLite consensus disorder prediction 260 324 - -
Aip07g01345 557 MobiDBLite consensus disorder prediction 171 209 - -
Aip07g01345 557 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 530 IPR044810 GO:0003700
Aip07g01345 557 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 27 530 - -
Aip07g01345 557 MobiDBLite consensus disorder prediction 436 557 - -
Aip07g01345 557 ProSiteProfiles WRKY domain profile. 206 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 SUPERFAMILY WRKY DNA-binding domain 373 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 MobiDBLite consensus disorder prediction 171 205 - -
Aip07g01345 557 SUPERFAMILY WRKY DNA-binding domain 204 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 MobiDBLite consensus disorder prediction 255 364 - -
Aip07g01345 557 Pfam WRKY DNA -binding domain 382 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 SMART WRKY_cls 381 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g01345 557 SMART WRKY_cls 205 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01345 Aip-Chr7 22229935 22233001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01345 57 556 WRKY Transcription Factor Family AT2G38470 48.833 5.43e-117 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g01345 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01345 K13424 - gmx:100127393 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01345 07 22229935 22233001 Aip07g01345 07 22229935 22233001 ECH