Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01327 ATGGAACTCCAAAGTGAAATGCAAGCAGCTAAACTTCTTAAAGCTCAAAGCCACATTTGGAATCACATATTCAATTTCATAAATTCTATGTCCCTTAAATGTGCTGTTGACTTAAGCATACCTGAAACCATTTATAATTATGGCCAACCCATGCCACTCTCAAAGCTTATTGCTTCATTGCAAATTCATCCATCAAAATCCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCATTCTGGCTTCTTCGCTACCAAGAATGTGGCCAACAATGAGCTCGAAGTCGGGTATGTTCTAACGGATTCATCTATGTTGCTACTTAAGGACAACCCCTTAAGTGTGACGCCTTTCTTGCTTGCCATGCTTGATCCCATCTTCACAAAACCATGGCATCAATTGTCTCCATGGTTTAGAAATGATGATTCTACACCATTTCAAACTGAGCATGGGATAATCTTTTTTGAGTTTTTTGGCCGTGAGCCTAAATTTAATAATCTTTACAATGACGCCATGGCAAGTGATGCTCGATTGGTTTGCAATTTGTTGCTTGATGACAAGTACAAGGGCGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACTGGAACTCTTGCAAAGGCCATTGCCAAATCATTTCCCCAATTGCAGTGCGTTGTATTCGACCAACCGCATGTTGTTGCTGGCTTCGAATTTGAAGGGACTGAGAACCTTAAATATGTTGGAGGAGACATGTTTGAGGCTATTCCTCCCTCTAATGCTATTTTGTTGAAG 780 0.4103 MELQSEMQAAKLLKAQSHIWNHIFNFINSMSLKCAVDLSIPETIYNYGQPMPLSKLIASLQIHPSKSSFIHRLMRILIHSGFFATKNVANNELEVGYVLTDSSMLLLKDNPLSVTPFLLAMLDPIFTKPWHQLSPWFRNDDSTPFQTEHGIIFFEFFGREPKFNNLYNDAMASDARLVCNLLLDDKYKGVFEGLESLVDVGGGTGTLAKAIAKSFPQLQCVVFDQPHVVAGFEFEGTENLKYVGGDMFEAIPPSNAILLK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01327 260 Coils Coil 256 260 - -
Aip07g01327 260 Pfam O-methyltransferase domain 130 260 IPR001077 GO:0008171
Aip07g01327 260 PANTHER ORCINOL O-METHYLTRANSFERASE 7 260 - -
Aip07g01327 260 PANTHER O-METHYLTRANSFERASE 7 260 IPR016461 GO:0008168
Aip07g01327 260 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 259 IPR029063 -
Aip07g01327 260 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Aip07g01327 260 Gene3D Vaccinia Virus protein VP39 107 260 IPR029063 -
Aip07g01327 260 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Aip07g01327 260 Gene3D - 2 106 IPR036388 -
Aip07g01327 260 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 260 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01327 Aip-Chr7 21779213 21779992 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01327 30 260 Monolignol Biosynthesis Gene Families AT5G54160 31.064 9.13e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01327 - K16040 aip:107609507 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01327 07 21779213 21779992 Aip07g01327 07 21779213 21779992 ECH