Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01315 ATGGAATTCCAAAGTGGAGAGAAGGCTGATCATGCCAAATTTCTTAAAGCTCACAGCCACGTGTGGAATCATATTTTTAGTTCCATAAACTCTATGTCTCTTAAATGTGCAGTTGAGCTAGGCATACCTGATGCCATACACAATTATGGCAAACCCATGCCTCTCTCACAACTCATTGCTTCATTGCCAATTCATCCATCAAAAGCCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCATTCCGGCATCTTTGTTACCGAAAATGTTATCAATAATAATAACGAGGTTGAAATTGGGTATGTTCTAACCGATTCATCTATGTTCCTACTTAAGAACAACCCCTTCAGTGTGACACCTTTGATGCTGATCAAACTTGGTCCCACCGTGACAAAGGCATGGCATCATTTGTCTGATTGGTTCAAGAACGACGATCTCACAGCATTTGAGACGGCACATGGAATGACGTTTTGGGAGTATACTGACAGCGTGCCTAAATATGGCCAATCCTTCATTGACGCCATGGCAAGTGATTCTCGATTTGTTAGTAGTCTGTTACTTGATGATAAGTGCAAGAGAGTGTTTGAGGGATTGGAATCGCTGGTTGATGTTGGTGGAGGCACTGGGACTGTTGCAAAGGCCATCGCCGAATCATTCCCAAACTTGAAGTGCTCCGTGTTTGATCTCCCAAGTGTTGTTGCTGGCTTGCAAGGAACTGACAACCTTGAATACATTGCAGGCGACATGTTCGCTGATCCTATTCCTCCTTCTCATGCCATTTTGTTGAAGTGGATTTTGCATAACTGGAACGATGAGGAATGCGTGAAAATATTGAAGAAATGCAAGGAGGCAATCATGCAAAAAAGGAAAGGAGGGAAGGTGATTATCATAGACATGGTTGTGGAGGATGATGACAAGAAAGGTTGTTACGATCAATCACTTGAAACACAGCTCTTCTTTGACATGCTTATGATGATGTTATTCTCTGGAAAAGAAAGAAATAAAAGAGAATGGAGCAACTTAATTGTTTCTGCTGGTTTTACTGACTATAAGATAACCCCAATTCTTGGATTGAGGTCAATCATTGAGATCTATCCATAG 1101 0.416 MEFQSGEKADHAKFLKAHSHVWNHIFSSINSMSLKCAVELGIPDAIHNYGKPMPLSQLIASLPIHPSKASFIHRLMRILIHSGIFVTENVINNNNEVEIGYVLTDSSMFLLKNNPFSVTPLMLIKLGPTVTKAWHHLSDWFKNDDLTAFETAHGMTFWEYTDSVPKYGQSFIDAMASDSRFVSSLLLDDKCKRVFEGLESLVDVGGGTGTVAKAIAESFPNLKCSVFDLPSVVAGLQGTDNLEYIAGDMFADPIPPSHAILLKWILHNWNDEECVKILKKCKEAIMQKRKGGKVIIIDMVVEDDDKKGCYDQSLETQLFFDMLMMMLFSGKERNKREWSNLIVSAGFTDYKITPILGLRSIIEIYP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01315 366 PANTHER O-METHYLTRANSFERASE 12 366 - -
Aip07g01315 366 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Aip07g01315 366 Gene3D - 4 110 IPR036388 -
Aip07g01315 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 364 IPR029063 -
Aip07g01315 366 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Aip07g01315 366 Gene3D Vaccinia Virus protein VP39 111 366 IPR029063 -
Aip07g01315 366 PANTHER O-METHYLTRANSFERASE 12 366 IPR016461 GO:0008168
Aip07g01315 366 CDD AdoMet_MTases 201 301 - -
Aip07g01315 366 Pfam O-methyltransferase domain 134 347 IPR001077 GO:0008171
Aip07g01315 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Aip07g01315 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01315 Aip-Chr7 21345159 21349388 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01315 27 352 Monolignol Biosynthesis Gene Families AT5G54160 32.326 2.45e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01315 - K16040 aip:107609507 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01315 07 21345159 21349388 Aip07g01315 07 21345159 21349388 ECH